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PLM4_65_coex_sep16_scaffold_3916

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3916_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(19..237)
DNA (219bp) protein (73aa)
DNA repair protein radC homolog Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR8_9BACT
radC; DNA repair protein RadC-like protein
DNA repair protein radC homolog {ECO:0000313|EMBL:CBE67201.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3916_2
unknown

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comp(666..1985)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein Tax=Chlorella variabilis RepID=E1ZRB2_CHLVA
copper amine oxidase-like protein
PLM4_65_coex_sep16_scaffold_3916_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(2050..2484)
DNA (435bp) protein (145aa)
Integrase catalytic region Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AW59_HERA2
integrase catalytic subunit
Tax=RBG_16_Chloroflexi_56_8_curated
PLM4_65_coex_sep16_scaffold_3916_4
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(2968..3369)
DNA (402bp) protein (134aa)
twitching motility protein PilT Tax=Thermus igniterrae RepID=UPI0003629A8A
PilT domain-containing protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_coex_sep16_scaffold_3916_5
R_NC10_66_22, NC10, Bacteria

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comp(3821..4096)
DNA (276bp) protein (92aa)
hypothetical protein bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4105..5205)
DNA (1101bp) protein (367aa)
hypothetical protein bin=bin3_NC10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_7

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comp(5355..6230)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000365C38F
Marine sediment metagenome DNA, contig: S01H1_S02192 {ECO:0000313|EMBL:GAF92720.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_3916_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6385..7515)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transmembrane anti-sigma factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7528..8091)
DNA (564bp) protein (188aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
RNA polymerase ECF-type sigma factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

8508..9170
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family Tax=Desulfitobacterium hafniense RepID=B8G057_DESHD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

9353..9961
DNA (609bp) protein (203aa)
outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

10191..12014
DNA (1824bp) protein (608aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKS1_9FIRM
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

12146..12613
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJK5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

12622..13269
DNA (648bp) protein (216aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13470..13694)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

13990..14991
DNA (1002bp) protein (334aa)
putative dihydroflavanol 4-reductase (EC:1.1.1.219)
Putative Dihydroflavanol 4-reductase Tax=Candidatus Nitrospira defluvii RepID=D8PB59_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

15123..15950
DNA (828bp) protein (276aa)
membrane protein; K08977 putative membrane protein bin=bin3_NC10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

15947..16948
DNA (1002bp) protein (334aa)
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6Y5_GEODF
hopanoid biosynthesis associated radical SAM protein HpnH
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3916_19
unknown

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16972..17049
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 19 items

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