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PLM4_65_coex_sep16_scaffold_4256

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4256_1
R_NC10_66_22, NC10, Bacteria

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2..586
DNA (585bp) protein (195aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=bin3_NC10 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin3_NC10 organism_group=NC10
gltA; citrate synthase (EC:2.3.3.1)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_2
unknown

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comp(708..914)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4256_3
R_NC10_66_22, NC10, Bacteria

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comp(974..1402)
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_4
R_NC10_66_22, NC10, Bacteria

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1759..2421
DNA (663bp) protein (221aa)
ftsE; cell division ABC transporter ATP-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ftsE; cell division ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_5
R_NC10_66_22, NC10, Bacteria

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2511..3404
DNA (894bp) protein (298aa)
Cell division protein FtsX Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL6_9BACT
Cell division protein FtsX
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_6
R_NC10_66_22, NC10, Bacteria

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3414..4682
DNA (1269bp) protein (423aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_7
R_NC10_66_22, NC10, Bacteria

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4830..6176
DNA (1347bp) protein (449aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal-processing protease (C-terminal-processing protease) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL8_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_8
R_NC10_66_22, NC10, Bacteria

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6236..7246
DNA (1011bp) protein (337aa)
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_9
R_NC10_66_22, NC10, Bacteria

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7243..7761
DNA (519bp) protein (173aa)
def; peptide deformylase (PDF) (Polypeptide deformylase) (EC:3.5.1.31)
Peptide deformylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJM0_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8520..9623)
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK89_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69711.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_4256_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10034..10645)
DNA (612bp) protein (204aa)
Putative PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJM1_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_12
R_NC10_66_22, NC10, Bacteria

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comp(10686..11063)
DNA (378bp) protein (126aa)
Putative PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJM1_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_13
R_NC10_66_22, NC10, Bacteria

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comp(11072..12007)
DNA (936bp) protein (312aa)
PpiC-type peptidyl-prolyl cis-trans isomerase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_14
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(12058..15342)
DNA (3285bp) protein (1095aa)
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-)
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_4256_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15546..16136)
DNA (591bp) protein (197aa)
cytidyltransferase-related domain bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rfaE bifunctional protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16194..17162)
DNA (969bp) protein (323aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17243..17788)
DNA (546bp) protein (182aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17989..18270)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLP8_9BACT
membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18258..18518)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLP8_9BACT
membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

18884..19225
DNA (342bp) protein (114aa)
two component system sensor histidine kinase (EC:2.7.13.3)
Two component system sensor histidine kinase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NIF0_DESTT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_21
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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19265..19825
DNA (561bp) protein (187aa)
Crp family transcriptional regulator bin=bin8_Chloro species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cyclic nucleotide-binding regulatory protein Crp
Tax=CSP1_4_Chloroflexi
PLM4_65_coex_sep16_scaffold_4256_22
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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20255..20785
DNA (531bp) protein (177aa)
Response regulator receiver protein bin=GWF2_Bacteroidetes_41_31 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
response regulator receiver protein
Tax=RBG_13_Chloroflexi_52_14_curated
PLM4_65_coex_sep16_scaffold_4256_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

20761..23079
DNA (2319bp) protein (773aa)
Histidine kinase (EC:2.7.13.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
His Kinase A (phosphoacceptor) domain protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_4256_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

23055..23792
DNA (738bp) protein (246aa)
Two-component response regulator Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 24 items

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