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PLM4_65_coex_sep16_scaffold_5474_15

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(10283..10768)

Top 3 Functional Annotations

Value Algorithm Source
pulQ; type II secretion system secretin lipoprotein PulQ; K02453 general secretion pathway protein D bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 158.0
  • Bit_score: 146
  • Evalue 1.80e-32
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 177.0
  • Bit_score: 107
  • Evalue 2.00e-21
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 158.0
  • Bit_score: 146
  • Evalue 2.50e-32

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Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 486
TTGACCCCCACCGTCCACCTCACCGGCGAGGTCACGGTCGAGCTGAACTTCGAGGTCAGCAGCGTCGGCGCGCCCATCGTGGGTGTGGCCGGCGGGCAGCTCCTCCCGCCCGTGAACACGCGCAACCTCGACACCTTCATCAAAGTCAAAAGCGGAGAGACCCGCCTGCTGGGCGGCCTCTTCCAGTCCGTCGAGTCCGTGGCCAACAGTCGTATCCCCTTCCTGAGCGACATTCCCTATCTGGGCCGTCTGTTCGTCAGCGGGGATCAGAGCAAGGCCACGGTCGACGTCCTGATCTCCATCACGCCACGGATCGTGAAAGTCCTGGACCGCCCGGAGCCCGACGTGGAGAACTTTCTTTCCGGAACCGCCGAAAGCTTCGGTCCGCCCGCGTCGGCTGTGCCCACAGTCCCGACCCCGGCGGCCCCCAGGCCGCCTGGCCTGCCGGGCGCGCCTGGCGTTCCGACCCCCGCTCCCCGGCCATGA
PROTEIN sequence
Length: 162
LTPTVHLTGEVTVELNFEVSSVGAPIVGVAGGQLLPPVNTRNLDTFIKVKSGETRLLGGLFQSVESVANSRIPFLSDIPYLGRLFVSGDQSKATVDVLISITPRIVKVLDRPEPDVENFLSGTAESFGPPASAVPTVPTPAAPRPPGLPGAPGVPTPAPRP*