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PLM4_65_coex_sep16_scaffold_5474

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5474_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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64..606
DNA (543bp) protein (181aa)
cycL; cytochrome c-type biogenesis protein cycL bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cycL; cytochrome c-type biogenesis protein cycL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_coex_sep16_scaffold_5474_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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801..1148
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFW4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68645.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_5474_3
CSP1_5_NC10, NC10, Bacteria

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1145..2278
DNA (1134bp) protein (378aa)
radical SAM protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
radical SAM protein
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_5474_4
unknown

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comp(2752..2958)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5474_5
RBG_16_NC10_65_8_curated, NC10, Bacteria

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3102..3341
DNA (240bp) protein (80aa)
De-hypoxanthine futalosine cyclase Tax=Chthonomonas calidirosea T49 RepID=S0EYU4_9BACT
de-hypoxanthine futalosine cyclase
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_6
R_NC10_66_22, NC10, Bacteria

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3650..4117
DNA (468bp) protein (156aa)
Similar to tr|Q3M7V5|Q3M7V5_ANAVT PilT protein-like Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIR2_9BACT
PilT-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_5474_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

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4402..5850
DNA (1449bp) protein (483aa)
RNA-splicing ligase RtcB Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFV6_9BACT
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5946..6770
DNA (825bp) protein (275aa)
Periplasmic binding protein bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
periplasmic binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_5474_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6964..7809
DNA (846bp) protein (282aa)
membrane protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
membrane protein
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_5474_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7904..8443
DNA (540bp) protein (180aa)
id=3296245 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_5474_11
unknown

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comp(8658..8870)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5474_12
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(8890..9312)
DNA (423bp) protein (141aa)
hypothetical protein bin=bin3_NC10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9362..9829)
DNA (468bp) protein (156aa)
type II secretion system protein G; K02456 general secretion pathway protein G bin=bin3_NC10 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
type II secretion system protein G
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_5474_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9816..10286)
DNA (471bp) protein (157aa)
type II secretory pathway, pseudopilin PulG; K02456 general secretion pathway protein G bin=bin3_NC10 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
general secretion pathway protein GspG
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_5474_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10283..10768)
DNA (486bp) protein (162aa)
pulQ; type II secretion system secretin lipoprotein PulQ; K02453 general secretion pathway protein D bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
type II and III secretion system protein
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_5474_16
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(10765..12165)
DNA (1401bp) protein (467aa)
pulQ; type II secretion system secretin lipoprotein PulQ; K02453 general secretion pathway protein D bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
type II and III secretion system protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_17
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(12288..12857)
DNA (570bp) protein (190aa)
id=14431134 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_18
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(12867..13391)
DNA (525bp) protein (175aa)
putative type IV pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO bin=bin3_NC10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_19
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(13388..14032)
DNA (645bp) protein (215aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
pulN; type II secretion system protein PulN
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_20
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(14026..14928)
DNA (903bp) protein (301aa)
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5474_21
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(15053..15643)
DNA (591bp) protein (197aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
pulE; type II secretion system ATPase PulE
Tax=RBG_16_NC10_65_8_curated
Displaying 21 items

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