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PLM4_65_coex_sep16_scaffold_11472

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_11472_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..592)
DNA (591bp) protein (197aa)
Helix-turn-helix domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P0_GEOUR
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABQ27108.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(601..1347)
DNA (747bp) protein (249aa)
TPR repeat-containing protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P1_GEOUR
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABQ27109.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1486..2403)
DNA (918bp) protein (306aa)
PfkB domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P2_GEOUR
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABQ27110.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2445..3662)
DNA (1218bp) protein (406aa)
SSU ribosomal protein S1P Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P3_GEOUR
rpsA; 30S ribosomal protein S1
SSU ribosomal protein S1P {ECO:0000313|EMBL:ABQ27111.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3789..4679)
DNA (891bp) protein (297aa)
Pseudouridine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5P6_GEOUR
RluA family pseudouridine synthase
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:ABQ27114.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5039..5236
DNA (198bp) protein (66aa)
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_11472_7
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5319..6224
DNA (906bp) protein (302aa)
Putative nucleoside-diphosphate-sugar epimerase bin=GWF2_Geobacter_54_21 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
nucleoside-diphosphate-sugar epimerase
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_65_coex_sep16_scaffold_11472_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6396..7778
DNA (1383bp) protein (461aa)
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:ABQ25595.1}; EC=5.99.1.- {ECO:0000313|EMBL:ABQ25595.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ATP-dependent RNA helicase DbpA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA04_GEOUR
ATP-dependent RNA helicase DbpA
PLM4_65_coex_sep16_scaffold_11472_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7985..8560
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G787_GEOUR
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ27655.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11472_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8837..9616
DNA (780bp) protein (260aa)
Efflux transporter, RND family, MFP subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G786_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ27654.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 10 items

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