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PLM4_65_coex_sep16_scaffold_11888

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_11888_1
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..134)
DNA (132bp) protein (44aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Geobacter sp. (strain M18) RepID=E8WHU8_GEOS8
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADW14498.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_11888_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(197..565)
DNA (369bp) protein (123aa)
VanZ family protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2Z7_GEODF
VanZ family protein
Membrane protein, putative {ECO:0000313|EMBL:ACM21343.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_11888_trna_2
unknown

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comp(689..760)
DNA (72bp)
transferRNA Glu
PLM4_65_coex_sep16_scaffold_11888_trna_1
unknown

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comp(771..841)
DNA (71bp)
transferRNA Gln
PLM4_65_coex_sep16_scaffold_11888_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(929..1474)
DNA (546bp) protein (182aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q2_GEOUR
pyruvate ferredoxin/flavodoxin oxidoreductase
Pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:ABQ26420.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11888_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1512..2324)
DNA (813bp) protein (271aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q3_GEOUR
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate enzyme domain protein TPP-binding protein {ECO:0000313|EMBL:ABQ26421.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11888_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2350..3405)
DNA (1056bp) protein (352aa)
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q4_GEOUR
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABQ26422.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11888_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3912..4448
DNA (537bp) protein (179aa)
Transcriptional regulator, MucR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q6_GEOUR
MucR family transcriptional regulator
Transcriptional regulator, MucR family {ECO:0000313|EMBL:ABQ26424.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_11888_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4933..5643
DNA (711bp) protein (237aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Biotin synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=BIOB_GEOUR
PLM4_65_coex_sep16_scaffold_11888_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5695..6426
DNA (732bp) protein (244aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ATP-dependent dethiobiotin synthetase BioD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q8_GEOUR
PLM4_65_coex_sep16_scaffold_11888_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6457..6855
DNA (399bp) protein (133aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q9_GEOUR
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Displaying 11 items

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