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PLM4_65_coex_sep16_scaffold_474

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_474_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..181
DNA (180bp) protein (60aa)
Peptidase M28 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GFG1_GEOUR
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ABQ26166.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_2
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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480..707
DNA (228bp) protein (76aa)
Uncharacterized conserved protein UCP020606 Tax=Geobacter sp. (strain M18) RepID=E8WTF9_GEOS8
hypothetical protein
Uncharacterized conserved protein UCP020606 {ECO:0000313|EMBL:ADW15442.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_474_3

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930..1859
DNA (930bp) protein (310aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037C648B
Uncharacterized protein {ECO:0000313|EMBL:KKM73789.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
epimerase
PLM4_65_coex_sep16_scaffold_474_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2062..2790
DNA (729bp) protein (243aa)
Carbonic anhydrase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
carbonic anhydrase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_474_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2859..4451
DNA (1593bp) protein (531aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WU78_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW15491.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_474_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4463..5221
DNA (759bp) protein (253aa)
Putative uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_474_7
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5298..6077
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase/isomerase Tax=Geobacter sp. (strain M18) RepID=E8WPY7_GEOS8
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADW15096.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_474_8
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6135..6575
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WP98_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW15081.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_474_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6569..7474)
DNA (906bp) protein (302aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25032.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7634..7966)
DNA (333bp) protein (111aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL4_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25031.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7976..8899)
DNA (924bp) protein (308aa)
Cysteine synthase {ECO:0000313|EMBL:ABQ25030.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ABQ25030.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Cysteine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL3_GEOUR
cysteine synthase
PLM4_65_coex_sep16_scaffold_474_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8940..9965)
DNA (1026bp) protein (342aa)
Polysaccharide deacetylase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL2_GEOUR
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABQ25029.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9969..10739)
DNA (771bp) protein (257aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25028.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10736..11677)
DNA (942bp) protein (314aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Methionyl-tRNA formyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=FMT_GEOUR
methionyl-tRNA formyltransferase
PLM4_65_coex_sep16_scaffold_474_15
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11677..12192)
DNA (516bp) protein (172aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Peptide deformylase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2D4_GEODF
PLM4_65_coex_sep16_scaffold_474_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12414..13025
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBM7_GEOUR
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ25025.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13052..14194
DNA (1143bp) protein (381aa)
Efflux transporter, RND family, MFP subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBM6_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ25024.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14191..17295
DNA (3105bp) protein (1035aa)
Acriflavin resistance protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBM5_GEOUR
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ25023.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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17292..18629
DNA (1338bp) protein (446aa)
Outer membrane efflux protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBM4_GEOUR
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABQ25022.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_20
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18756..19943)
DNA (1188bp) protein (396aa)
Sel1 domain protein repeat-containing protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2D0_GEODF
Sel1 domain-containing protein repeat-containing protein
SEL1 repeat-containing protein {ECO:0000313|EMBL:ACM19309.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_474_21
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20084..20836)
DNA (753bp) protein (251aa)
Methyltransferase type 11 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9F0_GEOUR
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ28418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20850..22007)
DNA (1158bp) protein (386aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ABQ28419.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ABQ28419.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glutamine--scyllo-inositol transaminase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9F1_GEOUR
PLM4_65_coex_sep16_scaffold_474_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21988..23001)
DNA (1014bp) protein (338aa)
Oxidoreductase domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9F2_GEOUR
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABQ28420.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_24
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23035..24435)
DNA (1401bp) protein (467aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM08141.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Conserved hypothetical tpr repeat protein bin=GWB2_Proteobacteria_55_19 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
PLM4_65_coex_sep16_scaffold_474_25
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24512..25963)
DNA (1452bp) protein (484aa)
NDP-hexose 2,3-dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9F3_GEOUR
NDP-hexose 2,3-dehydratase
NDP-hexose 2,3-dehydratase {ECO:0000313|EMBL:ABQ28421.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_26
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25932..26933)
DNA (1002bp) protein (334aa)
Glycosyl transferase, family 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9F4_GEOUR
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ28422.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_474_27
unknown

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26989..27126
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_474_28
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27730..28140)
DNA (411bp) protein (137aa)
Hemerythrin HHE cation binding domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBQ9_GEOUR
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ABQ24979.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 28 items

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