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PLM4_65_coex_sep16_scaffold_539

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_539_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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64..837
DNA (774bp) protein (258aa)
Type IV pilus assembly protein PilM Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ5_GEOUR
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ABQ26000.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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834..1409
DNA (576bp) protein (192aa)
Fimbrial assembly family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ6_GEOUR
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABQ26001.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1452..2051
DNA (600bp) protein (200aa)
Pilus assembly protein, PilO Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ7_GEOUR
pilus assembly protein, PilO
Pilus assembly protein, PilO {ECO:0000313|EMBL:ABQ26002.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2377..2634
DNA (258bp) protein (86aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26003.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2647..5406
DNA (2760bp) protein (920aa)
Type IV pilus secretin PilQ Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEZ9_GEOUR
type IV pilus secretin PilQ
Type IV pilus secretin PilQ {ECO:0000313|EMBL:ABQ26004.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5418..6020
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3I7_GEODF
hypothetical protein
Lipoprotein, putative {ECO:0000313|EMBL:ACM21408.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_539_7
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6215..11119
DNA (4905bp) protein (1635aa)
Ig family protein Tax=Geobacter sp. (strain M18) RepID=E8WQF2_GEOS8
Ig family protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_539_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11202..11531
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF02_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26007.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11560..12741
DNA (1182bp) protein (394aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Chorismate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=AROC_GEOUR
PLM4_65_coex_sep16_scaffold_539_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12950..14032
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-dehydroquinate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=AROB_GEOUR
aroB; 3-dehydroquinate synthase
PLM4_65_coex_sep16_scaffold_539_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14035..15015
DNA (981bp) protein (327aa)
Tetratricopeptide TPR_2 repeat protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF06_GEOUR
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ26011.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15015..15377
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF07_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26012.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..15919
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-dehydroquinate dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=AROQ_GEOUR
PLM4_65_coex_sep16_scaffold_539_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15940..17010
DNA (1071bp) protein (357aa)
Peptidase M24 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF09_GEOUR
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ABQ26014.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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17220..17651
DNA (432bp) protein (144aa)
Biotin carboxyl carrier protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF10_GEOUR
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABQ26015.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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17738..19078
DNA (1341bp) protein (447aa)
Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000313|EMBL:ABQ26016.1}; EC=6.3.4.14 {ECO:0000313|EMBL:ABQ26016.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Acetyl-CoA carboxylase carboxyltransferase subunit alpha Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF11_GEOUR
acetyl-CoA carboxylase, biotin carboxylase
PLM4_65_coex_sep16_scaffold_539_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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19081..19467
DNA (387bp) protein (129aa)
Glycine cleavage system H protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF12_GEOUR
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19495..20346
DNA (852bp) protein (284aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF13_GEOUR
hypothetical protein
PLM4_65_coex_sep16_scaffold_539_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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20394..22796
DNA (2403bp) protein (801aa)
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing Tax=Geobacter metallireducens RepID=Q39WZ5_GEOMG
sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing {ECO:0000313|EMBL:ABB31229.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_539_20
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22788..23240)
DNA (453bp) protein (151aa)
NUDIX hydrolase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF14_GEOUR
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABQ26019.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_21
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23327..23620)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3H4_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM21395.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_539_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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23870..25288
DNA (1419bp) protein (473aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF16_GEOUR
phosphoglucomutase/phosphomannomutase subunit alpha/beta
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ABQ26021.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_539_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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25513..26118
DNA (606bp) protein (202aa)
Nitrogen fixation protein NifU Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF17_GEOUR
Fe-S cluster assembly protein NifU
Nitrogen fixation protein NifU {ECO:0000256|PIRNR:PIRNR000375}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 23 items

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