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PLM4_65_coex_sep16_scaffold_849

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_849_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..781)
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM09271.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
SecC motif-containing protein bin=GWA2_Elusimicrobia_69_24 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
PLM4_65_coex_sep16_scaffold_849_2
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(774..1919)
DNA (1146bp) protein (382aa)
Sulfotransferase Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q111F8_TRIEI
Sulfotransferase domain protein {ECO:0000313|EMBL:GAM09270.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
sulfotransferase
PLM4_65_coex_sep16_scaffold_849_3
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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2009..2329
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q852_SULNB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
PLM4_65_coex_sep16_scaffold_849_4
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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2322..2651
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BQD3_9GAMM
FIG00954026: hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
PLM4_65_coex_sep16_scaffold_849_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3984..4220
DNA (237bp) protein (79aa)
Transcriptional regulator, XRE family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8M9_GEODF
XRE family transcriptional regulator
Helix-turn-helix XRE domain protein {ECO:0000313|EMBL:ACM18564.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_849_6
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4217..5464
DNA (1248bp) protein (416aa)
HipA N-terminal domain protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
HipA N-terminal domain-containing protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_849_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5493..6224)
DNA (732bp) protein (244aa)
UbiE/COQ5 methyltransferase Tax=Frankia sp. (strain CcI3) RepID=Q2JC43_FRASC
Putative methyltransferase YcgJ {ECO:0000313|EMBL:GAM09269.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
UbiE/COQ5 methyltransferase
PLM4_65_coex_sep16_scaffold_849_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6225..7601)
DNA (1377bp) protein (459aa)
Putative methyltransferase {ECO:0000313|EMBL:GAM09268.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Radical SAM domain protein bin=GWA2_Elusimicrobia_51_34 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Fe-S oxidoreductase
PLM4_65_coex_sep16_scaffold_849_9
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7783..9252)
DNA (1470bp) protein (490aa)
Radical SAM domain protein Tax=Streptomyces griseus RepID=G0Q5D1_STRGR
Putative methyltransferase {ECO:0000313|EMBL:GAM09267.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Fe-S oxidoreductase
PLM4_65_coex_sep16_scaffold_849_10
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9255..9992)
DNA (738bp) protein (246aa)
DNA recombination protein RmuC Tax=Streptomyces sp. CNB091 RepID=UPI000364B453
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:GAM09266.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
DNA gyrase B subunit
PLM4_65_coex_sep16_scaffold_849_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10331..12817
DNA (2487bp) protein (829aa)
Parallel beta-helix repeat Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G578_GEOUR
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat {ECO:0000313|EMBL:ABQ26946.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12814..13521
DNA (708bp) protein (236aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G577_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26945.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_13
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13608..14180
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M514_GEODF
hypothetical protein
Lipoprotein, putative {ECO:0000313|EMBL:ACM21698.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_849_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14265..15191
DNA (927bp) protein (309aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G576_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26944.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15178..16020
DNA (843bp) protein (281aa)
High-affinity nickel-transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G575_GEOUR
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABQ26943.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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16017..16586
DNA (570bp) protein (190aa)
Tetratricopeptide TPR_2 repeat protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G574_GEOUR
TPR repeat-containing protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ26942.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16586..17566
DNA (981bp) protein (327aa)
Parallel beta-helix repeat Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G573_GEOUR
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat {ECO:0000313|EMBL:ABQ26941.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17563..18867
DNA (1305bp) protein (435aa)
Major facilitator superfamily MFS_1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G572_GEOUR
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ26940.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18869..19180
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25957.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_849_20
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19173..20171
DNA (999bp) protein (333aa)
Radical SAM domain protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M511_GEODF
radical SAM protein
Radical SAM domain iron-sulfur cluster-binding oxidoreductase {ECO:0000313|EMBL:ACM21695.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_849_21
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20168..20458
DNA (291bp) protein (97aa)
Fe-S oxidoreductase-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV4_GEOUR
Fe-S oxidoreductase-like protein
Fe-S oxidoreductase-like protein {ECO:0000313|EMBL:ABQ25959.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 21 items

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