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PLM4_65_coex_sep16_scaffold_7834

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_7834_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
ferroxidase (EC:1.16.3.1)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ferroxidase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L4_GEOUR
PLM4_65_coex_sep16_scaffold_7834_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(413..1921)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27083.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1945..2715)
DNA (771bp) protein (257aa)
SPFH domain, Band 7 family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L6_GEOUR
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ABQ27084.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2808..4019)
DNA (1212bp) protein (404aa)
Nodulation efficiency protein NfeD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L7_GEOUR
hypothetical protein
Nodulation efficiency protein NfeD {ECO:0000313|EMBL:ABQ27085.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4135..5460
DNA (1326bp) protein (442aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L8_GEOUR
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ27086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5517..5960)
DNA (444bp) protein (148aa)
Thioesterase superfamily protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5M7_GEOUR
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABQ27095.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6096..6770)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Agrobacterium tumefaciens 5A RepID=H0HHE0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:CEL28336.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
PLM4_65_coex_sep16_scaffold_7834_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6770..9841)
DNA (3072bp) protein (1024aa)
Putative DNA methylase Tax=Agrobacterium tumefaciens 5A RepID=H0HHE1_RHIRD
Putative DNA methylase {ECO:0000313|EMBL:EHJ95424.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_7834_9
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(9939..10328)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Aminicenantes RepID=UPI0003806833
helicase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_coex_sep16_scaffold_7834_10
RLO_RIF03_38_15, RIF3, Bacteria

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comp(10549..12855)
DNA (2307bp) protein (769aa)
Adenine specific DNA methyltransferase bin=GWB2_Nitrospirae_rel_47_37 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Adenine specific DNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_65_coex_sep16_scaffold_7834_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12924..13742)
DNA (819bp) protein (273aa)
Phage SPO1 DNA polymerase-related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5M9_GEOUR
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABQ27097.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_7834_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13790..14233
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5N0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27098.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 12 items

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