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PLM4_65_coex_sep16_scaffold_1529

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1529_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
potassium-transporting ATPase A (EC:3.6.3.12)
Potassium-transporting ATPase A chain {ECO:0000255|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000255|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000255|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000255|HAMAP-Rule:MF_00275}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Potassium-transporting ATPase A chain Tax=Geobacter uraniireducens (strain Rf4) RepID=ATKA_GEOUR
PLM4_65_coex_sep16_scaffold_1529_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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688..2754
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Potassium-transporting ATPase B chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAG1_GEOUR
K+-transporting ATPase B
PLM4_65_coex_sep16_scaffold_1529_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2817..3383
DNA (567bp) protein (189aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Potassium-transporting ATPase C chain Tax=Geobacter uraniireducens (strain Rf4) RepID=ATKC_GEOUR
PLM4_65_coex_sep16_scaffold_1529_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3437..6112
DNA (2676bp) protein (892aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Osmosensitive K+ channel signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAF9_GEOUR
osmosensitive K+ channel signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1529_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6129..6836
DNA (708bp) protein (236aa)
Two component transcriptional regulator, winged helix family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAH7_GEOUR
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ25426.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1529_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6854..7543)
DNA (690bp) protein (230aa)
Glutamine amidotransferase class-I Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAG9_GEOUR
glutamine amidotransferase
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABQ25418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1529_7
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7537..7974)
DNA (438bp) protein (146aa)
PilT protein domain protein bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACD94946.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_coex_sep16_scaffold_1529_8
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7971..8213)
DNA (243bp) protein (81aa)
Putative uncharacterized protein bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD94947.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_coex_sep16_scaffold_1529_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8319..8657)
DNA (339bp) protein (113aa)
Alkylphosphonate utilization operon protein PhnA Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A8_GEODF
alkylphosphonate utilization operon protein PhnA
Alkylphosphonate utilization protein PhnA, putative {ECO:0000313|EMBL:ACM20196.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_1529_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8731..9012)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZT4_GEODF
hypothetical protein
Antitoxin, XRE family {ECO:0000313|EMBL:ACM18898.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_1529_11
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9250..9516
DNA (267bp) protein (89aa)
Gsr3504 protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
addiction module antidote protein
Tax=CG_Syntroph_01
PLM4_65_coex_sep16_scaffold_1529_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9516..9803
DNA (288bp) protein (96aa)
Uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
plasmid stabilization system
Tax=CG_Syntroph_01
PLM4_65_coex_sep16_scaffold_1529_13
unknown

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comp(10120..10695)
DNA (576bp) protein (192aa)
protein-export membrane protein
PLM4_65_coex_sep16_scaffold_1529_14
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10881..11999
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IP71_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ11937.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
transposase IS116/IS110/IS902 family protein
PLM4_65_coex_sep16_scaffold_1529_15
unknown

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12471..12689
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1529_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12584..13336)
DNA (753bp) protein (251aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAI8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25417.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1529_17
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13355..13534)
DNA (180bp) protein (60aa)
Uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_1529_18
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13737..14003
DNA (267bp) protein (89aa)
Gsr3504 protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
addiction module antidote protein
Tax=CG_Syntroph_01
PLM4_65_coex_sep16_scaffold_1529_19
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14469..14783
DNA (315bp) protein (105aa)
Transcriptional regulator, XRE family bin=GWB2_Pelobacter_53_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
XRE family transcriptional regulator
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_1529_20
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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15037..16128
DNA (1092bp) protein (364aa)
Uncharacterized protein Tax=Sphingomonas aromaticivorans RepID=O85888_SPHAR
HSP90 family molecular chaperone-like protein
Tax=RBG_13_Chloroflexi_46_9_curated
PLM4_65_coex_sep16_scaffold_1529_21
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16383..17618)
DNA (1236bp) protein (412aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAI8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25417.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 21 items

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