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PLM4_65_coex_sep16_scaffold_1597

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1597_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1316)
DNA (1314bp) protein (438aa)
nitrogenase molybdenum-iron protein subunit alpha (EC:1.18.6.1)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Nitrogenase protein alpha chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAL1_GEOUR
PLM4_65_coex_sep16_scaffold_1597_2
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1385..2254)
DNA (870bp) protein (290aa)
nitrogenase iron protein (EC:1.18.6.1)
Nitrogenase iron protein bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_1597_3
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2642..3211
DNA (570bp) protein (190aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK9_GEOUR
membrane protein
Membrane protein {ECO:0000313|EMBL:AJE04913.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_1597_4
unknown

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comp(3482..4135)
DNA (654bp) protein (218aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1597_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4253..5119)
DNA (867bp) protein (289aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
UTP-glucose-1-phosphate uridylyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M772_GEODF
UTP-glucose-1-phosphate uridylyltransferase GalU
PLM4_65_coex_sep16_scaffold_1597_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5154..6032)
DNA (879bp) protein (293aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Methylenetetrahydrofolate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM7_GEOUR
methylenetetrahydrofolate reductase
PLM4_65_coex_sep16_scaffold_1597_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6051..6698)
DNA (648bp) protein (216aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25374.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1597_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6786..7643)
DNA (858bp) protein (286aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Bifunctional protein FolD Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=FOLD_GEODF
PLM4_65_coex_sep16_scaffold_1597_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7960..9876
DNA (1917bp) protein (639aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3U3_GEOUR
PAS/PAC sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1597_10
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10050..11306
DNA (1257bp) protein (419aa)
Radical SAM domain protein bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
radical SAM protein
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_1597_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11329..12309
DNA (981bp) protein (327aa)
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1597_12
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12408..13187)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B5D5A8
Uncharacterized protein {ECO:0000313|EMBL:KIE42411.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1597_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13303..14628)
DNA (1326bp) protein (442aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Amino acid-binding domain sensor histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3D5_GEOUR
integral membrane sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1597_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14832..15269)
DNA (438bp) protein (146aa)
Large-conductance mechanosensitive channel Tax=Clostridium ultunense Esp RepID=M1Z5A2_9CLOT
mechanosensitive ion channel protein MscL
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM4_65_coex_sep16_scaffold_1597_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15338..18553)
DNA (3216bp) protein (1072aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9K9_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ABQ28477.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
hypothetical protein
Displaying 15 items

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