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PLM4_65_coex_sep16_scaffold_1945

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1945_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
Condensin subunit ScpB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R3_GEOUR
putative transcriptional regulator
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(519..1355)
DNA (837bp) protein (279aa)
Condensin subunit ScpA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R4_GEOUR
chromosome segregation and condensation protein ScpA
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1388..2371)
DNA (984bp) protein (328aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ABQ26433.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ABQ26433.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Tryptophanyl-tRNA synthetase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R5_GEOUR
PLM4_65_coex_sep16_scaffold_1945_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2522..3202)
DNA (681bp) protein (227aa)
Peptidase M50 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R6_GEOUR
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ABQ26434.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3392..5083
DNA (1692bp) protein (564aa)
RNA binding S1 domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R7_GEOUR
RNA-binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ABQ26435.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5064..5624
DNA (561bp) protein (187aa)
RNA binding S1 domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R7_GEOUR
RNA-binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ABQ26435.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5706..6146)
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3R8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26436.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6514..7230)
DNA (717bp) protein (239aa)
Response regulator, PilZ domain-containing Tax=Geobacter sulfurreducens RepID=D7AH17_GEOSK
Polar-differentiation response regulator DivK {ECO:0000313|EMBL:GAM09010.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
response regulator, PilZ domain-containing
PLM4_65_coex_sep16_scaffold_1945_9
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7569..7820
DNA (252bp) protein (84aa)
Transcriptional regulator, AbrB family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5W6_GEOUR
AbrB family transcriptional regulator
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7817..8218
DNA (402bp) protein (134aa)
PilT protein domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5W7_GEOUR
PilT domain-containing protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8749..9009
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WQ00_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_12
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9169..9972
DNA (804bp) protein (268aa)
Response regulator receiver Tax=Geobacter sp. (strain M18) RepID=E8WPZ9_GEOS8
response regulator receiver
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_13
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10021..11112
DNA (1092bp) protein (364aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G518_GEOUR
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11109..11846
DNA (738bp) protein (246aa)
Cytochrome B561 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G519_GEOUR
cytochrome B561
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_15
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11878..12432
DNA (555bp) protein (185aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G520_GEOUR
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_trna_2
unknown

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comp(12659..12740)
DNA (82bp)
transferRNA Leu
PLM4_65_coex_sep16_scaffold_1945_trna_1
unknown

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comp(12873..12947)
DNA (75bp)
transferRNA Pro
PLM4_65_coex_sep16_scaffold_1945_16
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13098..13460
DNA (363bp) protein (121aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_17
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13483..13665
DNA (183bp) protein (61aa)
Putative uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_18
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13817..14212)
DNA (396bp) protein (132aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=Geobacter sp. (strain M21) RepID=C6E844_GEOSM
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1945_19
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14295..14672)
DNA (378bp) protein (126aa)
Ferredoxin Tax=Geobacter sulfurreducens RepID=D7AGU5_GEOSK
Ferredoxin {ECO:0000313|EMBL:KIH75976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
ferredoxin
PLM4_65_coex_sep16_scaffold_1945_20
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14724..15683
DNA (960bp) protein (320aa)
ADP-ribosylglycohydrolase-related protein Tax=Geobacter metallireducens RepID=Q39Q85_GEOMG
ADP-ribosylglycohydrolase-like protein
ADP-ribosylglycohydrolase-related protein {ECO:0000313|EMBL:ABB33589.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_1945_21
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15768..17246
DNA (1479bp) protein (493aa)
RND efflux system, outer membrane lipoprotein, NodT family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCF4_GEOUR
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ24740.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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17243..18373
DNA (1131bp) protein (377aa)
Efflux transporter, RND family, MFP subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCF5_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ24741.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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18383..21487
DNA (3105bp) protein (1035aa)
Acriflavin resistance protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCF6_GEOUR
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ24742.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_24
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21647..22417
DNA (771bp) protein (257aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCU6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24596.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1945_25
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22427..22894)
DNA (468bp) protein (156aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
bacterioferritin
Bacterioferritin bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_coex_sep16_scaffold_1945_26
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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23146..24843
DNA (1698bp) protein (566aa)
Ribonucleoside-diphosphate reductase Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39UD5_GEOMG
ribonucleoside diphosphate reductase, adenosylcobalamin-dependent
Ribonucleoside diphosphate reductase, adenosylcobalamin-dependent, putative {ECO:0000313|EMBL:ABB32139.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_1945_27
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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24869..26359
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Q3_GEOUR
aldehyde dehydrogenase
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_1945_28
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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26515..27687
DNA (1173bp) protein (391aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
gcdH; glutaryl-CoA dehydrogenase
Tax=GWC2_Geobacteraceae_53_11_curated
Displaying items 1-30 of 31 in total

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