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PLM4_65_coex_sep16_scaffold_1951

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1951_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..968)
DNA (966bp) protein (322aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
DNA polymerase III subunit beta Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDX2_GEOUR
PLM4_65_coex_sep16_scaffold_1951_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1186..2535)
DNA (1350bp) protein (450aa)
Chromosomal replication initiator protein DnaA Tax=Geobacter uraniireducens (strain Rf4) RepID=DNAA_GEOUR
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1951_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2957..3319
DNA (363bp) protein (121aa)
Ribonuclease P protein component {ECO:0000255|HAMAP-Rule:MF_00227}; Short=RNase P protein {ECO:0000255|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000255|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00227};; Protein C5 {ECO:0000255|HAMAP-Rule:MF_00227}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribonuclease P protein component Tax=Geobacter uraniireducens (strain Rf4) RepID=RNPA_GEOUR
rnpA; ribonuclease P
PLM4_65_coex_sep16_scaffold_1951_4
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3261..3533
DNA (273bp) protein (91aa)
Putative membrane protein insertion efficiency factor Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=E1P6F2_GEOBB
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM4_65_coex_sep16_scaffold_1951_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3552..5138
DNA (1587bp) protein (529aa)
Membrane protein insertase YidC Tax=Geobacter uraniireducens (strain Rf4) RepID=YIDC_GEOUR
60 kDa inner membrane insertion protein
Membrane protein insertase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Foldase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000255|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000255|HAMAP-Rule:MF_01810}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1951_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5162..6529
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
tRNA modification GTPase MnmE Tax=Geobacter uraniireducens (strain Rf4) RepID=MNME_GEOUR
trmE; tRNA modification GTPase TrmE
PLM4_65_coex_sep16_scaffold_1951_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6649..8523
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Geobacter uraniireducens (strain Rf4) RepID=MNMG_GEOUR
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1951_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8520..9179
DNA (660bp) protein (220aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000255|HAMAP-Rule:MF_00074}; EC=2.1.1.170 {ECO:0000255|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074}; Short=16S rRNA m7G methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribosomal RNA small subunit methyltransferase G Tax=Geobacter uraniireducens (strain Rf4) RepID=RSMG_GEOUR
methyltransferase GidB
PLM4_65_coex_sep16_scaffold_1951_9
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9419..9853)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Geovibrio thiophilus RepID=UPI0003B3BBAD
transcriptional regulator protein-like protein
Tax=CG_Delta_02
PLM4_65_coex_sep16_scaffold_1951_10
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10187..11251
DNA (1065bp) protein (355aa)
PAS/PAC sensor signal transduction histidine kinase bin=GWC2_Pelobacter_58_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
PLM4_65_coex_sep16_scaffold_1951_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11394..12125
DNA (732bp) protein (244aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9V0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28568.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1951_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12617..12916)
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9U1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28559.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1951_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12916..13056)
DNA (141bp) protein (47aa)
Rubrerythrin Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9U0_GEOUR
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABQ28558.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 13 items

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