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PLM4_65_coex_sep16_scaffold_2506

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2506_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1112
DNA (1110bp) protein (370aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD65_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24486.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1210..2223
DNA (1014bp) protein (338aa)
pacL; Cation-transporting ATPase pacL (EC:3.6.3.-)
Cation-transporting ATPase pacL {ECO:0000313|EMBL:CBE69333.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBE69333.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ATPase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003756A8D
PLM4_65_coex_sep16_scaffold_2506_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2201..3949
DNA (1749bp) protein (583aa)
pacL; Cation-transporting ATPase pacL (EC:3.6.3.-)
Cation-transporting ATPase pacL {ECO:0000313|EMBL:CBE69333.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBE69333.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Cation-transporting ATPase pacL Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI40_9BACT
PLM4_65_coex_sep16_scaffold_2506_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4317..4529
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WJ94_GEOS8
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_2506_5
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4526..4855
DNA (330bp) protein (110aa)
Transcriptional modulator of MazE/toxin, MazF bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
growth inhibitor PemK
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_2506_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4980..5846)
DNA (867bp) protein (289aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ABQ26978.1}; EC=1.1.1.60 {ECO:0000313|EMBL:ABQ26978.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
2-hydroxy-3-oxopropionate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B0_GEOUR
PLM4_65_coex_sep16_scaffold_2506_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5963..6619)
DNA (657bp) protein (219aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Endonuclease III Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B1_GEOUR
PLM4_65_coex_sep16_scaffold_2506_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6616..6846)
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26980.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7162..8025
DNA (864bp) protein (288aa)
PHP C-terminal domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B3_GEOUR
phosphotransferase domain-containing protein
PHP C-terminal domain protein {ECO:0000313|EMBL:ABQ26981.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8083..8904)
DNA (822bp) protein (274aa)
Transport-associated protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B4_GEOUR
transport-associated protein
Transport-associated protein {ECO:0000313|EMBL:ABQ26982.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9035..9718)
DNA (684bp) protein (228aa)
MgtC/SapB transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B6_GEOUR
MgtC/SapB transporter
MgtC/SapB transporter {ECO:0000313|EMBL:ABQ26984.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9811..10728)
DNA (918bp) protein (306aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B7_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26985.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10739..11644)
DNA (906bp) protein (302aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B8_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26986.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11641..12681)
DNA (1041bp) protein (347aa)
Sporulation domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5B9_GEOUR
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABQ26987.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2506_15
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12855..13460)
DNA (606bp) protein (202aa)
Elongation factor G bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
translation elongation factor G
Tax=GWC2_Geobacteraceae_53_11_curated
Displaying 15 items

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