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PLM4_65_coex_sep16_scaffold_2509

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2509_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1918)
DNA (1917bp) protein (639aa)
trifunctional NADH dehydrogenase I subunit B/C/D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B/C/D; EC=1.6.5.11;; NADH dehydrogenase I subunit B/C/D; NDH-1 subunit B/C/D; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
NADH-quinone oxidoreductase subunit B/C/D Tax=Geobacter uraniireducens (strain Rf4) RepID=NUBCD_GEOUR
PLM4_65_coex_sep16_scaffold_2509_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2045..2503)
DNA (459bp) protein (153aa)
NADH-quinone oxidoreductase subunit A 1 {ECO:0000255|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A 1 {ECO:0000255|HAMAP-Rule:MF_01394}; NDH-1 subunit A 1 {ECO:0000255|HAMAP-Rule:MF_01394}; NUO1 1 {ECO:0000255|HAMAP-Rule:MF_01394}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
NADH-quinone oxidoreductase subunit A 1 Tax=Geobacter uraniireducens (strain Rf4) RepID=NUOA1_GEOUR
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
PLM4_65_coex_sep16_scaffold_2509_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2550..2759)
DNA (210bp) protein (70aa)
Thioredoxin domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCZ6_GEOUR
thioredoxin domain-containing protein
Thioredoxin domain protein {ECO:0000313|EMBL:ABQ24551.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2787..3008)
DNA (222bp) protein (74aa)
Thioredoxin domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCZ6_GEOUR
thioredoxin domain-containing protein
Thioredoxin domain protein {ECO:0000313|EMBL:ABQ24551.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3091..4536)
DNA (1446bp) protein (482aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glycine dehydrogenase (Decarboxylating) beta subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCZ7_GEOUR
PLM4_65_coex_sep16_scaffold_2509_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4533..5861)
DNA (1329bp) protein (443aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00712};; Glycine cleavage system P-protein subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Probable glycine dehydrogenase (decarboxylating) subunit 1 Tax=Geobacter uraniireducens (strain Rf4) RepID=GCSPA_GEOUR
PLM4_65_coex_sep16_scaffold_2509_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5861..6235)
DNA (375bp) protein (125aa)
Glycine cleavage system H protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCZ9_GEOUR
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6349..7440)
DNA (1092bp) protein (364aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Aminomethyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD00_GEOUR
glycine cleavage system T protein
PLM4_65_coex_sep16_scaffold_2509_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7800..8066)
DNA (267bp) protein (89aa)
Addiction module toxin, Txe/YoeB family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDY6_GEOUR
addiction module antitoxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:ABQ25644.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8060..8302)
DNA (243bp) protein (81aa)
Prevent-host-death family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDY5_GEOUR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABQ25643.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8619..9038)
DNA (420bp) protein (140aa)
Nucleic acid-binding protein contains PIN domain-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC58_GEOUR
nucleic acid binding protein
Nucleic acid-binding protein contains PIN domain-like protein {ECO:0000313|EMBL:ABQ24841.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9035..9328)
DNA (294bp) protein (98aa)
Prevent-host-death family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC59_GEOUR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABQ24842.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2509_13
unknown

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9362..9496
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2509_14
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9475..11319)
DNA (1845bp) protein (615aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000379A2CF
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Displaying 14 items

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