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PLM4_65_coex_sep16_scaffold_2711

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2711_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_2711_2
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165..1322)
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase domain-containing protein bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
acyl-CoA dehydrogenase domain-containing protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_2711_3
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1341..2402)
DNA (1062bp) protein (354aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_2711_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2657..3463)
DNA (807bp) protein (269aa)
Phosphoesterase, PA-phosphatase related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3P9_GEOUR
PA-phosphatase-like protein
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABQ26417.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2711_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3600..4625)
DNA (1026bp) protein (342aa)
Glycosyl transferase, family 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G839_GEOUR
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ27957.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2711_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4659..6275)
DNA (1617bp) protein (539aa)
Uncharacterized protein Tax=Bacteria RepID=Q74C30_GEOSL
Uncharacterized protein {ECO:0000313|EMBL:AJY71088.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_2711_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6287..7555
DNA (1269bp) protein (423aa)
ATPase (AAA+ superfamily)-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B8_GEOUR
ATPase AAA
ATPase (AAA+ superfamily)-like protein {ECO:0000313|EMBL:ABQ27336.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2711_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7578..9221)
DNA (1644bp) protein (548aa)
Uncharacterized protein Tax=Bacteria RepID=Q74C30_GEOSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAR35222.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM4_65_coex_sep16_scaffold_2711_9
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9209..9382)
DNA (174bp) protein (58aa)
UDP-glucose/UDP-N-acetylglucosamine 4-epimerase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9P0_GEOBB
galE; UDP-glucose/UDP-N-acetylglucosamine 4-epimerase
UDP-glucose/UDP-N-acetylglucosamine 4-epimerase {ECO:0000313|EMBL:ACH40214.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM4_65_coex_sep16_scaffold_2711_10
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9506..10978)
DNA (1473bp) protein (491aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AEG33397.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AEG33397.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0.5JP17-16).;"
UDP-phosphate galactose phosphotransferase Tax=Thermus islandicus RepID=UPI0003B62655
PLM4_65_coex_sep16_scaffold_2711_11
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10990..11931)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3W8_GEOUR
UDP-glucuronic acid decarboxylase 1 {ECO:0000313|EMBL:GAM07755.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
NAD-dependent epimerase/dehydratase
PLM4_65_coex_sep16_scaffold_2711_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11938..12420)
DNA (483bp) protein (161aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:GAM07756.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
UDP-glucose 6-dehydrogenase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
UDP-glucose 6-dehydrogenase
PLM4_65_coex_sep16_scaffold_2711_13
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12607..13788)
DNA (1182bp) protein (394aa)
Glycosyl transferase group 1 Tax=Burkholderia graminis C4D1M RepID=B1FZW2_9BURK
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDT10472.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
glycosyl transferase family protein
PLM4_65_coex_sep16_scaffold_2711_14
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13836..14930)
DNA (1095bp) protein (365aa)
Mannosyltransferase Tax=Bacillus azotoformans LMG 9581 RepID=K6BZ32_BACAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY73975.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM4_65_coex_sep16_scaffold_2711_15
unknown

Not on your lists

comp(15047..16303)
DNA (1257bp) protein (419aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2711_16

Not on your lists

comp(16306..16845)
DNA (540bp) protein (180aa)
Glycosyltransferase family 2 protein Tax=uncultured bacterium RepID=K2B1E5_9BACT
Glycosyltransferase family 2 protein {ECO:0000313|EMBL:EKD55809.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family 2
PLM4_65_coex_sep16_scaffold_2711_17
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16875..17333)
DNA (459bp) protein (153aa)
Glycosyl transferase family 2 Tax=Geobacter sp. (strain M21) RepID=C6E0L2_GEOSM
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACT18636.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_2711_18
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17466..18569)
DNA (1104bp) protein (368aa)
Glycosyl transferase group 1 Tax=uncultured bacterium RepID=K2CV70_9BACT
glycosyltransferase
Tax=CG_Rhodof_01
PLM4_65_coex_sep16_scaffold_2711_19
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18569..19375)
DNA (807bp) protein (269aa)
Type 11 methyltransferase bin=GWE1_T_denit_62_9 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=CG_Rhodof_01
PLM4_65_coex_sep16_scaffold_2711_20
unknown

Not on your lists

comp(19608..20831)
DNA (1224bp) protein (408aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2711_21
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20886..21386)
DNA (501bp) protein (167aa)
acetyltransferase Tax=Scytonema hofmanni RepID=UPI00034597A9
Acetyltransferase {ECO:0000313|EMBL:KIE09766.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
acetyltransferase
PLM4_65_coex_sep16_scaffold_2711_22
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(21367..22476)
DNA (1110bp) protein (370aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
degT; Pleiotropic regulatory protein
Tax=GWB1_Spirochaetes_36_13_curated
PLM4_65_coex_sep16_scaffold_2711_23
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(22514..23494)
DNA (981bp) protein (327aa)
Putative nucleotide sugar epimerase/dehydratase bin=GWB1_CP_36_13 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
NAD dependent epimerase/dehydratase
Tax=GWB1_Spirochaetes_36_13_curated
PLM4_65_coex_sep16_scaffold_2711_24
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(23525..24229)
DNA (705bp) protein (235aa)
Putative Mannose-1-phosphate guanylyltransferase bin=GWB1_CP_36_13 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Tax=GWB1_Spirochaetes_36_13_curated
PLM4_65_coex_sep16_scaffold_2711_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24250..25230)
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase Tax=Eubacterium sp. CAG:38 RepID=R7HE33_9FIRM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDE36452.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
NAD-dependent dehydratase
PLM4_65_coex_sep16_scaffold_2711_26
unknown

Not on your lists

comp(25255..25545)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2711_27
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(25573..26592)
DNA (1020bp) protein (340aa)
polysaccharide biosynthesis protein bin=bin1_lowGC species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
polysaccharide biosynthesis protein
Tax=CSP1_2_Dadabacteria
PLM4_65_coex_sep16_scaffold_2711_28
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26876..27157)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Geobacter sp. (strain M21) RepID=C6E0J3_GEOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT18617.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_2711_29
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27331..27717)
DNA (387bp) protein (129aa)
Gll3555 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFH0_GLOVI
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_coex_sep16_scaffold_2711_30
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27717..27947)
DNA (231bp) protein (77aa)
Gsl3556 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFG9_GLOVI
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
Displaying items 1-30 of 44 in total

View Taxonomy