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PLM4_65_coex_sep16_scaffold_5410

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5410_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
DNA polymerase III, alpha subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4G7_GEOUR
PLM4_65_coex_sep16_scaffold_5410_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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842..2230
DNA (1389bp) protein (463aa)
Hydrolase, TatD family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4H0_GEOUR
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABQ26688.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2337..3581
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4J6_GEOUR
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ26714.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4135..5097
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4J9_GEOUR
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ26717.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5094..5423)
DNA (330bp) protein (110aa)
Class I peptide chain release factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K0_GEOUR
class I peptide chain release factor
Class I peptide chain release factor {ECO:0000313|EMBL:ABQ26718.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5642..5986
DNA (345bp) protein (115aa)
Metal dependent phosphohydrolase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K1_GEOUR
metal dependent phophohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABQ26719.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6189..8102
DNA (1914bp) protein (638aa)
Putative PAS/PAC sensor protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K2_GEOUR
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABQ26720.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8249..9346
DNA (1098bp) protein (366aa)
BioD-like protein N-terminal domain of phosphotransacetylase-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K3_GEOUR
phosphotransacetylase domain-containing protein
BioD-like protein N-terminal domain of phosphotransacetylase-like protein {ECO:0000313|EMBL:ABQ26721.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9415..10665
DNA (1251bp) protein (417aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26723.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10651..11337)
DNA (687bp) protein (229aa)
Protein-disulfide isomerase-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K6_GEOUR
protein-disulfide isomerase-like protein
Protein-disulfide isomerase-like protein {ECO:0000313|EMBL:ABQ26724.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5410_trna_1
unknown

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comp(11578..11651)
DNA (74bp)
transferRNA Arg
PLM4_65_coex_sep16_scaffold_5410_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11906..12421)
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Adenine phosphoribosyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=APT_GEOUR
PLM4_65_coex_sep16_scaffold_5410_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12409..12882)
DNA (474bp) protein (158aa)
RNA polymerase sigma factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4S6_GEOUR
RpoD family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 13 items

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