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PLM4_65_coex_sep16_scaffold_3266

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3266_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..803
DNA (801bp) protein (267aa)
Chorismate mutase {ECO:0000313|EMBL:ABQ25661.1}; EC=5.4.99.5 {ECO:0000313|EMBL:ABQ25661.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Chorismate mutase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE06_GEOUR
prephenate dehydratase
PLM4_65_coex_sep16_scaffold_3266_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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893..1753
DNA (861bp) protein (287aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:ABQ25662.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ABQ25662.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Prephenate dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE07_GEOUR
PLM4_65_coex_sep16_scaffold_3266_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1834..3123
DNA (1290bp) protein (430aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=AROA_GEOUR
3-phosphoshikimate 1-carboxyvinyltransferase
PLM4_65_coex_sep16_scaffold_3266_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3120..3827
DNA (708bp) protein (236aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Cytidylate kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE09_GEOUR
PLM4_65_coex_sep16_scaffold_3266_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3885..4733
DNA (849bp) protein (283aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000255|HAMAP-Rule:MF_00191}; EC=1.17.1.2 {ECO:0000255|HAMAP-Rule:MF_00191};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=ISPH_GEOUR
PLM4_65_coex_sep16_scaffold_3266_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4800..6563
DNA (1764bp) protein (588aa)
30S ribosomal protein S1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE11_GEOUR
SSU ribosomal protein S1P {ECO:0000313|EMBL:ABQ25666.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
rpsA; 30S ribosomal protein S1
PLM4_65_coex_sep16_scaffold_3266_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6619..6900
DNA (282bp) protein (94aa)
Histone family protein DNA-binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE12_GEOUR
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ABQ25667.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3266_trna_1
unknown

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6937..7020
DNA (84bp)
transferRNA Leu
PLM4_65_coex_sep16_scaffold_3266_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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7117..7794
DNA (678bp) protein (226aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00035CFD38
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_3266_9
unknown

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8266..8478
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3266_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8706..9305)
DNA (600bp) protein (200aa)
PHP C-terminal domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEK4_GEOUR
phosphotransferase domain-containing protein
PHP C-terminal domain protein {ECO:0000313|EMBL:ABQ25859.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3266_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9662..9877
DNA (216bp) protein (72aa)
Peptidoglycan-binding domain 1 protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE27_GEOUR
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ABQ25682.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3266_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9865..11103
DNA (1239bp) protein (413aa)
Peptidoglycan-binding domain 1 protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE27_GEOUR
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ABQ25682.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3266_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11100..11825
DNA (726bp) protein (242aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE28_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25683.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3266_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11902..12210
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9M1_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM20593.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3266_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12273..13502
DNA (1230bp) protein (410aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE30_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25685.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 16 items

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