ggKbase home page

PLM4_65_coex_sep16_scaffold_3271

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3271_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..380
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24919.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

409..1077
DNA (669bp) protein (223aa)
Nitrite and sulphite reductase 4Fe-4S region Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX3_GEOUR
nitrite and sulfite reductase 4Fe-4S region
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ABQ24920.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1120..1875
DNA (756bp) protein (252aa)
tRNA 2-thiocytidine biosynthesis protein TtcA Tax=Geobacter uraniireducens (strain Rf4) RepID=TTCA_GEOUR
C32 tRNA thiolase
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_4
unknown

Not on your lists

comp(1802..2020)
DNA (219bp) protein (73aa)
hypothetical protein
PLM4_65_coex_sep16_scaffold_3271_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..3109
DNA (978bp) protein (326aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX5_GEOUR
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABQ24922.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3234..3653)
DNA (420bp) protein (140aa)
Transcriptional regulator, TraR/DksA family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX8_GEOUR
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ABQ24925.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3764..5167)
DNA (1404bp) protein (468aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribosomal protein S12 methylthiotransferase RimO Tax=Geobacter uraniireducens (strain Rf4) RepID=RIMO_GEOUR
MiaB-like tRNA modifying enzyme YliG
PLM4_65_coex_sep16_scaffold_3271_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5215..5700)
DNA (486bp) protein (162aa)
UPF0234 protein Gura_0717 Tax=Geobacter uraniireducens (strain Rf4) RepID=Y717_GEOUR
putative nucleotide-binding protein
UPF0234 protein Gura_0717 {ECO:0000255|HAMAP-Rule:MF_00632}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5782..6546)
DNA (765bp) protein (255aa)
Outer membrane lipoprotein carrier protein LolA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBW1_GEOUR
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6588..7379)
DNA (792bp) protein (264aa)
Outer membrane lipoprotein carrier protein LolA Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1Y9_GEODF
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3271_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7485..8093)
DNA (609bp) protein (203aa)
CheC, inhibitor of MCP methylation Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBW3_GEOUR
CheC, inhibitor of MCP methylation
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:ABQ24930.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3271_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8108..9760)
DNA (1653bp) protein (551aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
CheA signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBW4_GEOUR
CheA signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_3271_13
unknown

Not on your lists

comp(9764..9838)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 13 items

View Taxonomy