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PLM4_65_coex_sep16_scaffold_3298

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3298_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..671
DNA (669bp) protein (223aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00005}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Argininosuccinate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=ASSY_GEOUR
PLM4_65_coex_sep16_scaffold_3298_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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764..1210
DNA (447bp) protein (149aa)
NUDIX hydrolase, type 15 Tax=Geobacter sulfurreducens RepID=D7AM65_GEOSK
NUDIX hydrolase, type 15
NUDIX hydrolase, type 15 {ECO:0000313|EMBL:AAR33489.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM4_65_coex_sep16_scaffold_3298_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1217..2344
DNA (1128bp) protein (376aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDA6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24446.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3298_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2493..3869
DNA (1377bp) protein (459aa)
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Argininosuccinate lyase Tax=Geobacter uraniireducens (strain Rf4) RepID=ARLY_GEOUR
argininosuccinate lyase
PLM4_65_coex_sep16_scaffold_3298_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3956..4795
DNA (840bp) protein (280aa)
Fibronectin, type III domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDA8_GEOUR
fibronectin I domain-containing protein
Fibronectin, type III domain protein {ECO:0000313|EMBL:ABQ24448.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3298_6
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4923..6176
DNA (1254bp) protein (418aa)
Diaminopimelate decarboxylase Tax=Geobacter sulfurreducens RepID=D7ADC7_GEOSK
lysA; diaminopimelate decarboxylase
Tax=GWC2_Geobacteraceae_48_7_curated
PLM4_65_coex_sep16_scaffold_3298_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6201..7100
DNA (900bp) protein (300aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=DAPA_GEOUR
PLM4_65_coex_sep16_scaffold_3298_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7213..8016
DNA (804bp) protein (268aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
4-hydroxy-tetrahydrodipicolinate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=DAPB_GEOUR
PLM4_65_coex_sep16_scaffold_3298_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8040..8264
DNA (225bp) protein (75aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6N5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27453.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3298_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8293..9525
DNA (1233bp) protein (411aa)
LL-diaminopimelate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000255|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000255|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000255|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000255|HAMAP-Rule:MF_01642};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
LL-diaminopimelate aminotransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=DAPAT_GEOUR
L,L-diaminopimelate aminotransferase
PLM4_65_coex_sep16_scaffold_3298_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9650..9931
DNA (282bp) protein (94aa)
Prevent-host-death family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX7_GEOUR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABQ24924.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3298_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9928..10350
DNA (423bp) protein (141aa)
PilT protein domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX6_GEOUR
PilT domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ABQ24923.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3298_13
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10406..10639
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM08580.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Putative uncharacterized protein bin=GWF2_Melioribacter_38_21 species=Campylobacter jejuni genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
PLM4_65_coex_sep16_scaffold_3298_14
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10620..10862
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM08581.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Putative uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
PLM4_65_coex_sep16_scaffold_3298_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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10932..13559
DNA (2628bp) protein (876aa)
Putative Type II site-specific deoxyribonuclease Tax=Microcystis aeruginosa PCC 9432 RepID=I4FBR5_MICAE
type IIS restriction enzyme R and M protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM4_65_coex_sep16_scaffold_3298_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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13556..14101
DNA (546bp) protein (182aa)
Tax=RBG_16_Chloroflexi_56_8_curated
Displaying 16 items

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