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PLM4_65_coex_sep16_scaffold_3551

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3551_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..819)
DNA (819bp) protein (273aa)
Glycosyl transferase, family 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAB5_GEOUR
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ25484.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(764..2818)
DNA (2055bp) protein (685aa)
Formate dehydrogenase {ECO:0000313|EMBL:ABQ25486.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABQ25486.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAB7_GEOUR
PLM4_65_coex_sep16_scaffold_3551_3
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3041..5236
DNA (2196bp) protein (732aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase, Cache_1, HAMP and PAS domain-containing Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39RU5_GEOMG
sensor histidine kinase, Cache_1, HAMP and PAS domain-containing
PLM4_65_coex_sep16_scaffold_3551_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5275..5865
DNA (591bp) protein (197aa)
Chromate transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAA0_GEOUR
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ABQ25488.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5865..6389
DNA (525bp) protein (175aa)
Chromate transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAA1_GEOUR
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ABQ25489.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6443..6598)
DNA (156bp) protein (52aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAA2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25490.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6644..7036)
DNA (393bp) protein (131aa)
Transcriptional regulator, TraR/DksA family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAA3_GEOUR
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ABQ25491.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7325..9037)
DNA (1713bp) protein (571aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA91_GEOUR
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ25499.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3551_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9124..9354)
DNA (231bp) protein (77aa)
CcdB-like toxin protein bin=GWF2_Geobacter_54_21 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_3551_10
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9664..10164)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Burkholderia vietnamiensis AU4i RepID=U2FUV7_BURVI
Uncharacterized protein {ECO:0000313|EMBL:KFL54427.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_3551_11
unknown

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comp(10203..10643)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3551_12
unknown

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comp(10711..11175)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3551_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11244..11843)
DNA (600bp) protein (200aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WIH9_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW14583.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_3551_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11937..12317)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR67956.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Displaying 14 items

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