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PLM4_65_coex_sep16_scaffold_8174

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8174_1
unknown

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comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_8174_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(89..370)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3D3_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19543.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_8174_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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752..1411
DNA (660bp) protein (220aa)
UPF0502 protein Gura_0277 Tax=Geobacter uraniireducens (strain Rf4) RepID=Y277_GEOUR
hypothetical protein
UPF0502 protein Gura_0277 {ECO:0000255|HAMAP-Rule:MF_01584}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8174_4
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1738..2100
DNA (363bp) protein (121aa)
glyoxalase Tax=Gillisia marina RepID=UPI00029AA422
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM4_65_coex_sep16_scaffold_8174_5
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2159..2653
DNA (495bp) protein (165aa)
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000313|EMBL:CCJ37140.1};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
Peptide methionine sulfoxide reductase MsrA Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7L0Y1_METBM
PLM4_65_coex_sep16_scaffold_8174_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2739..3029
DNA (291bp) protein (97aa)
Uncharacterized small conserved protein-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD43_GEOUR
hypothetical protein
Uncharacterized small conserved protein-like protein {ECO:0000313|EMBL:ABQ24499.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8174_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3096..3827
DNA (732bp) protein (244aa)
Uncharacterized metal-binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD44_GEOUR
hypothetical protein
Uncharacterized metal-binding protein {ECO:0000313|EMBL:ABQ24500.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8174_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3858..4394)
DNA (537bp) protein (179aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
2'-5' RNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD45_GEOUR
2'-5' RNA ligase
PLM4_65_coex_sep16_scaffold_8174_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4406..5455)
DNA (1050bp) protein (350aa)
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation)-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD46_GEOUR
poly-gamma-glutamate biosynthesis protein
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation)-like protein {ECO:0000313|EMBL:ABQ24502.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8174_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5564..5848
DNA (285bp) protein (95aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Serine--tRNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=SYS_GEOUR
Displaying 10 items

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