ggKbase home page

PLM4_65_coex_sep16_scaffold_8948

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8948_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224..2707
DNA (2484bp) protein (828aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39Y72_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB30802.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_8948_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2704..3453
DNA (750bp) protein (250aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G577_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26945.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8948_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3532..4092
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEV1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25956.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_8948_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4124..5707
DNA (1584bp) protein (528aa)
Membrane protein DUF318 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q748U4_GEOSL
hypothetical protein
Permease {ECO:0000313|EMBL:AJY69170.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
PLM4_65_coex_sep16_scaffold_8948_5
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6128..6448
DNA (321bp) protein (107aa)
Cupin superfamily barrel domain protein Tax=Geobacter metallireducens RepID=Q39Y67_GEOMG
cupin
Cupin superfamily barrel domain protein {ECO:0000313|EMBL:ABB30807.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_8948_6
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..6968
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39Y66_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02484.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_8948_7
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..7965
DNA (1008bp) protein (336aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ADR2_GEOSK
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AJE04790.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_8948_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7969..8811
DNA (843bp) protein (281aa)
Iron-sulfur cluster-binding oxidoreductase bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
iron-sulfur cluster-binding oxidoreductase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_8948_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8908..9810
DNA (903bp) protein (301aa)
ABC transporter, periplasmic substrate-binding lipoprotein Tax=Geobacter metallireducens RepID=Q39Y63_GEOMG
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE02486.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_8948_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9817..10359
DNA (543bp) protein (181aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G570_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02487.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_8948_11
unknown

Not on your lists

comp(10319..11035)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_8948_12
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

12105..16301
DNA (4197bp) protein (1399aa)
Putative transmembrane protein (Fibronectin III domain and Gp5 C-terminal repeat) bin=GWE2_Gammaproteobacteria_37_16 species=Legionella longbeachae genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat)
Tax=BJP_IG2103_Bacteroidetes_37_22
Displaying 12 items

View Taxonomy