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PLM4_65_coex_sep16_scaffold_1434_4

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(2955..6488)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 1159.0
  • Bit_score: 2013
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ7_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 1159.0
  • Bit_score: 2013
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 1159.0
  • Bit_score: 2013
  • Evalue 0.0

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3534
TTGCTATGGTTGGTTGCTGCCACCATATCCGGAGGTTTCATCCCAGAAAATGAAATGACCACCGATCTTACCCCGATCTTACAACGGATTGTCACAGAGCTTTCCCCTGCCGAGTCCTCCGTCTCCCTCACCGGCCTCAAGGGCTCAGCCCCGGCCTATCTGCTTTCTCGGCTGCTTGCCGAGGTGCAAAGGACTTTCCTCATCATTACCCCGGATACGGAGAGTGCCGAGGAACTGTGCCGGGAGCTGCGTTTTTACAGCGGCCGGGACGACGCGGTCCTCTATTTCCCCCCCTGGGACACGACGCCGTTTGAAACCGCGTCTCCCCATGCCGACGTCACCGGCCAGCGCCTGAATACGCTGTTCCGGCTGATGGACGGCCGCGCCGGCGCAGTGGTGACATCCCTCCCCGCCGTAATGCAAAAGCTCCTGCCGCGCACGACACTTGGAGCGGTTTCCCAGTATATCGTCTCGGGCGAAGAGGTGGAACGGGAAAAACTCCTGGAAAAGCTGGTGAAACTCGGCTATTCCCATGTGCCGCTGGTGGAAGACCGTGGCGGTTTTTCCATCCGCGGCGGCATTCTCGACATTTTCCCTCCGGATCAGCCGCTGCCGGTCAGGATCGAGTTCTTCGGCGATTTTGTCGATACCATCCGCACCTTTGACCCGGTCAGCCAGCGCTCCCTGCAGCCGCTCGAGGAACTGATCCTCCTCCCTTCGCGGGAGGTAATCCTGTCGGAAGAGATCCTGGAGAAGTTTGGCCCGCGCCTGAAAAAGCGCTGCGATGCCATCGAGCTGCCGGCGACCCGCCGCCGGGACCTGCTGGAGCAGCTGCAGAACGCCATCTACCCGCCCGGGATCGAGTACCTCCAGCCGCTGTTCCATCCCGGCCTGGAGACCCTGTTTGATTATGCCGGCCAGGAACTGGTCAGGGTGATCTACGACCCCGCCGCGCTGGCCGCTGCCCGTGAGGGCTTTGCCGAAGAGCTGGCCGCAGCCGGGCAAAGGGCGTTCGAGCGCGACATTATCTCCTGCGACAAAGCAGAACTTTTTCTCGACGCTGACAGTCTGACACGGTTGCTTGCCGAGGGGCGGCGACTGGAGATTCCTTTCCTGGAACTGCATGGTGCGGGGGATGTGGGAGAAAAAATCAGGTTTAAGGCCGAGGAGAACAGCGACCTGAAGCTGGATATATCCACGGACAGTGAGGGTGTATTGAGGCCCCTCGTGGAAAAGCTCCTCGCCTGGCAGGCGGCGAAGAGCCGGGTGCTGATGGTCTGTCACCAGCACGGCCAGGCGCAGCGGCTCTATGAGCTCCTCTCCCATTACAATCTCCCCCTGACCATTTCGGAACGGGATTTCCCGTCGGAGCTGGGGCGCGGAGACAGGCGGCTTGACATCCTGGTGGGAGAGATTTCCCGCGGTTTCCGCCTCCCGGAAGATGGGCTGGTGGTCATCGCCGAAGAAGAGATTTTTGGCGCAAGGGTCAAGCGCCGCGGTCTTTCCGAGGTGCGGAAAAAGCAGCTCCTCACCTCCCTGGCCGAGCTGAAGCCAGGTGACCATATGGTTCACCTCGATTTCGGCGTAGGTATTTACCGCGGCTTGCAGCATCTGACCTTTTCCGGTATGGAGGGGGATTTCCTGCTCCTGGAATATGCGGGCGCCGACAAGCTCTACCTGCCGGTGGACCGGATCAACCTGGTGCAGCGCTATGTCGGGGCTGAGGGTGTCGAACCCCATGTGGACAAACTGGGGGGCGCCGGCTGGGAGAAGACCAAGGCCAAGGCCAGGGCCGCAATCCAGGAGATGGCTGAGGAGCTGCTCAAGATCTATGCTGCACGCCAGGTGGAGGAAGGGCACGCCTTTTCTCCACGGGACGAGCTCTACCGGGAATTCGAGGCATCATTCGCCTTTGAGGAGACGCCTGACCAGCAGGCGGCGATTGATGATGTCTTGTGCGACATGGAGAGCAAGAGGCCGATGGACCGACTCATCTGCGGTGATGTCGGCTACGGCAAGACCGAGGTTGCCATGCGTGGCGCCTTCAAGGCGGTGATGGACGGCAAGCAGGTGGCGGTGCTCGTACCGACGACAGTGCTGGCCCAGCAGCATCTGGAAACCTTTGTCGAACGATTCAAGGTATATCCGGTCAAGATAGAAATGCTCTCCCGCTTCCGCTCGCCAAAGGAGCAGAAGCTGATCCTCGAAGGGGTGAAAAAGGGGGATGTCGATATCATCATCGGCACCCATCGCCTGCTGCAGAAGGATGTGGAATTCCGCGACCTGGGACTCCTCGTCATCGATGAGGAACAGCGTTTCGGTGTGGCGCACAAGGAGCGGCTCAAGAAATACCGGGCAATAGTTGATATCATGACCATGACGGCAACCCCGATCCCGCGCACCCTCTACATGTCGCTCATGGGGATCCGGGACCTTTCCATCATCGACACGCCGCCGGTGGACCGCCTCTCGATCAAGACATTTGTGGCGCGTGCCTCCGACGAACTGATCCGCGAAGCAGTACTGAGGGAGTTGCGCCGTGGCGGCCAGGTGTTTTACGTCCATAACCGGGTGCAGACCATTGCTGCCATGGCCGAGCATCTGCAGCGGCTCGTCCCCGAAGCGCGGATTGCCGTCGGGCACGGCCAGATGGAAGACAAGTCCCTGGAAAGGGTCATGCTCGGCTTCATGCATGGCGAGACCAACCTGCTCCTCTGCACCACCATTATCGAGTCCGGGCTTGACATCCCGACCGCCAACACCCTGATCGTCAACCGGGCCGATACCTTCGGCCTGTCACAGCTCTACCAGTTGCGCGGCCGGGTGGGTCGAGCCAAGCAGCGGGCCTACGCCTACTTCCTTATCCCCGGCGAAGGAGCCCTGTCCACGGAGGCGCGGGAGCGACTCAAGATTATCCAGGAGCTTACCGAGCTGGGTGCCGGCTTTCGCATCGCCACACACGACCTGGAGATCCGGGGCGGCGGTGATCTCCTCGGAGCCCGGCAGTCCGGCGACATCGCCGCAGTCGGATTTGAGCTCTATACGGAACTCCTCGAAGAGGCGATCAGGCAGATGAAAGGGGAAGAGCTGGTCGAACGGGTTGAACCGGAGATCAAGCTGCGCATTCCTGCCTTTGTCCCTGAGGATTATGTCCGCGAGCCGAATCAGCGGCTTATCATCTACAAGAGGCTGAGCCAGGCGGCATCAGAGGAGGATGTCGGGGAAATAGCGGCGGAGATGGTGGACCGCTTCGGCAAACTGCCGCTGGCAACTGTTTACCTGCTGGAAGTGATGAAGTTGCGTGTCAGCCTGAAAGCGATGCTGGTCAAGGAGATTGAATTCGACGGTAAACGGCTCATTCTCTCCTTCCATCAGAAGACCCCGGTGTCACCCGACGTCATCATCGCCCTGATCCGTCAGCAGCCGAAGAAATACCAGTTTACCCCCGACTTCCGTCTCTATGCGGAACTGGCAGACAGCTCGTTCGACGGCATCCTCGGCGAGGCCAGAAATCTCTTGAAAAGGCTTGGCTGA
PROTEIN sequence
Length: 1178
LLWLVAATISGGFIPENEMTTDLTPILQRIVTELSPAESSVSLTGLKGSAPAYLLSRLLAEVQRTFLIITPDTESAEELCRELRFYSGRDDAVLYFPPWDTTPFETASPHADVTGQRLNTLFRLMDGRAGAVVTSLPAVMQKLLPRTTLGAVSQYIVSGEEVEREKLLEKLVKLGYSHVPLVEDRGGFSIRGGILDIFPPDQPLPVRIEFFGDFVDTIRTFDPVSQRSLQPLEELILLPSREVILSEEILEKFGPRLKKRCDAIELPATRRRDLLEQLQNAIYPPGIEYLQPLFHPGLETLFDYAGQELVRVIYDPAALAAAREGFAEELAAAGQRAFERDIISCDKAELFLDADSLTRLLAEGRRLEIPFLELHGAGDVGEKIRFKAEENSDLKLDISTDSEGVLRPLVEKLLAWQAAKSRVLMVCHQHGQAQRLYELLSHYNLPLTISERDFPSELGRGDRRLDILVGEISRGFRLPEDGLVVIAEEEIFGARVKRRGLSEVRKKQLLTSLAELKPGDHMVHLDFGVGIYRGLQHLTFSGMEGDFLLLEYAGADKLYLPVDRINLVQRYVGAEGVEPHVDKLGGAGWEKTKAKARAAIQEMAEELLKIYAARQVEEGHAFSPRDELYREFEASFAFEETPDQQAAIDDVLCDMESKRPMDRLICGDVGYGKTEVAMRGAFKAVMDGKQVAVLVPTTVLAQQHLETFVERFKVYPVKIEMLSRFRSPKEQKLILEGVKKGDVDIIIGTHRLLQKDVEFRDLGLLVIDEEQRFGVAHKERLKKYRAIVDIMTMTATPIPRTLYMSLMGIRDLSIIDTPPVDRLSIKTFVARASDELIREAVLRELRRGGQVFYVHNRVQTIAAMAEHLQRLVPEARIAVGHGQMEDKSLERVMLGFMHGETNLLLCTTIIESGLDIPTANTLIVNRADTFGLSQLYQLRGRVGRAKQRAYAYFLIPGEGALSTEARERLKIIQELTELGAGFRIATHDLEIRGGGDLLGARQSGDIAAVGFELYTELLEEAIRQMKGEELVERVEPEIKLRIPAFVPEDYVREPNQRLIIYKRLSQAASEEDVGEIAAEMVDRFGKLPLATVYLLEVMKLRVSLKAMLVKEIEFDGKRLILSFHQKTPVSPDVIIALIRQQPKKYQFTPDFRLYAELADSSFDGILGEARNLLKRLG*