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PLM4_65_coex_sep16_scaffold_1434

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1434_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..849
DNA (849bp) protein (283aa)
Chaperone DnaJ domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDI0_GEOUR
chaperone DnaJ domain-containing protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:ABQ24359.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(931..1941)
DNA (1011bp) protein (337aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDH9_GEOUR
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM4_65_coex_sep16_scaffold_1434_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1977..2900)
DNA (924bp) protein (308aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ8_GEOUR
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM4_65_coex_sep16_scaffold_1434_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2955..6488)
DNA (3534bp) protein (1178aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Transcription-repair-coupling factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ7_GEOUR
transcription-repair coupling factor
PLM4_65_coex_sep16_scaffold_1434_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6742..7806
DNA (1065bp) protein (355aa)
MCP methyltransferase, CheR-type Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ3_GEOUR
hypothetical protein
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ABQ24352.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7793..8518)
DNA (726bp) protein (242aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ2_GEOUR
PLM4_65_coex_sep16_scaffold_1434_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8896..9213)
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24350.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9237..9857
DNA (621bp) protein (207aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ0_GEOUR
HEAT repeat-containing PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABQ24349.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9883..11250)
DNA (1368bp) protein (456aa)
Metal dependent phosphohydrolase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDI9_GEOUR
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABQ24348.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11247..12893)
DNA (1647bp) protein (549aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDK6_GEOUR
HEAT repeat-containing PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABQ24347.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13009..14403
DNA (1395bp) protein (465aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDK5_GEOUR
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_12
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14498..14854
DNA (357bp) protein (119aa)
RNA polymerase-binding transcription factor DksA Tax=Geobacter sp. (strain M18) RepID=E8WK23_GEOS8
TraR/DksA family transcriptional regulator
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1434_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14909..17251
DNA (2343bp) protein (781aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
GAF sensor signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDK3_GEOUR
GAF sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1434_trna_1
unknown

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17332..17404
DNA (73bp)
transferRNA Ala
PLM4_65_coex_sep16_scaffold_1434_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17663..19519)
DNA (1857bp) protein (619aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDK0_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ABQ24341.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1434_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19782..21704)
DNA (1923bp) protein (641aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ9_GEOUR
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ24340.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21753..22301)
DNA (549bp) protein (183aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDL5_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24339.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1434_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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22488..23747
DNA (1260bp) protein (420aa)
Bifunctional protein GlmU {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.7.7.23 {ECO:0000255|HAMAP-Rule:MF_01631};; N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; Glucosamine-1-phosphate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.3.1.157 {ECO:0000255|HAMAP-Rule:MF_01631};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Bifunctional protein GlmU Tax=Geobacter uraniireducens (strain Rf4) RepID=GLMU_GEOUR
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Displaying 18 items

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