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PLM4_65_coex_sep16_scaffold_2004_4

Organism: PLM4_65_coex_sep16_Liptonbacteria_48_7

partial RP 36 / 55 MC: 2 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(2800..3147)

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 111.0
  • Bit_score: 141
  • Evalue 4.10e-31
50S ribosomal protein L20p similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 115.0
  • Bit_score: 117
  • Evalue 2.30e-24
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 111.0
  • Bit_score: 173
  • Evalue 1.40e-40

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Taxonomy

R_OD1_53_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCCCAGAGTTAAACGCGGAACAACGGCGCATAGAAAGCGCGAAAAATTATTAAAGAAAACTAAGGGTTTCAATTGGAGCCGCAAATCCAAAGAGCGCGCCGCCAAGGAAGCTCTGCTTCACGCACTTTCCCGCAAATTCCGGGGCCGTAAGGAAAAGAAACGCACCTTCCGCTCCCTCTGGACCGTGCAGATTAACGCCGCTTTGCGCGCAAGCGACTCCAAATACAGCACCTTCATCGGCGCACTTAAGAAAAAGGGTATTAAGCTGGATCGCAAGGTGCTCGCGGATTTGGCCAAGAACGAACCGCAGATATTTAAAAAGATTTTAGAGGCTACAAGTAAATAA
PROTEIN sequence
Length: 116
MPRVKRGTTAHRKREKLLKKTKGFNWSRKSKERAAKEALLHALSRKFRGRKEKKRTFRSLWTVQINAALRASDSKYSTFIGALKKKGIKLDRKVLADLAKNEPQIFKKILEATSK*