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PLM4_65_coex_sep16_scaffold_2004

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2004_1
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000381738A
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
PLM4_65_coex_sep16_scaffold_2004_2
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

343..2082
DNA (1740bp) protein (580aa)
DNA polymerase X family (EC:2.7.7.7)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XFW6_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_2004_3
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

2079..2645
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XFM2_9BACT
NUDIX domain protein
Tax=GWB1_OD1_49_6_curated
PLM4_65_coex_sep16_scaffold_2004_4
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists


comp(2800..3147)
DNA (348bp) protein (116aa)
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L20p
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
PLM4_65_coex_sep16_scaffold_2004_5
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(3159..3326)
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_2004_6
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

comp(3323..3784)
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 Tax=Clostridium sp. L2-50 RepID=A7VD35_9CLOT bin=ACD81 species=Clostridium sp. L2-50 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Translation initiation factor IF-3 {ECO:0000313|EMBL:KKW46666.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_2004_7
unknown

Not on your lists

4055..4468
DNA (414bp) protein (138aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2004_8
unknown

Not on your lists

comp(4590..5018)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2004_9
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5221..5442
DNA (222bp) protein (74aa)
hypothetical protein bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
PLM4_65_coex_sep16_scaffold_2004_10
CG_Omnitr_05, Omnitrophica, Bacteria

Not on your lists

comp(5481..5858)
DNA (378bp) protein (126aa)
Uncharacterized protein bin=GWA1_ZB2_49_26 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=CG_Omnitr_05
PLM4_65_coex_sep16_scaffold_2004_11
CSP1_7_WWE3, WWE3, Bacteria

Not on your lists

5914..6348
DNA (435bp) protein (145aa)
id=14424186 bin=bin11_novelCP tax=bin11_novelCP organism_group=Unknown_CP
Tax=CSP1_7_WWE3
PLM4_65_coex_sep16_scaffold_2004_12
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6432..6794)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UE80_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
PLM4_65_coex_sep16_scaffold_2004_13
unknown

Not on your lists

7515..7727
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2004_14
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(7767..8204)
DNA (438bp) protein (146aa)
SsrA-binding protein bin=GWC1_TM7_41_48 species=unknown genus=unknown taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_TM7_41_48 organism_group=TM7
ssrA-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_2004_15
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


8455..10137
DNA (1683bp) protein (561aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
arginyl-tRNA synthetase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
PLM4_65_coex_sep16_scaffold_2004_16

Not on your lists

10183..12948
DNA (2766bp) protein (922aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine-tRNA ligase {ECO:0000313|EMBL:KKT22421.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8b.;"
Isoleucine--tRNA ligase bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
PLM4_65_coex_sep16_scaffold_2004_17
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

12950..13531
DNA (582bp) protein (194aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
PLM4_65_coex_sep16_scaffold_2004_18
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(13521..13985)
DNA (465bp) protein (155aa)
cst:CLOST_1872 trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
Displaying 18 items

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