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PLM4_65_coex_sep16_scaffold_11483

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_11483_1

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comp(3..746)
DNA (744bp) protein (248aa)
FAD/FMN-containing dehydrogenases Tax=uncultured marine microorganism RepID=A5CFV9_9ZZZZ
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:CAM58143.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism.;"
FAD linked oxidase
PLM4_65_coex_sep16_scaffold_11483_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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912..1181
DNA (270bp) protein (90aa)
MscS Mechanosensitive ion channel:Conserved TM helix bin=GWF2_Lentisphaerae_50_93 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
MscS mechanosensitive ion channel:conserved TM helix
Tax=GWF2_Lentisphaerae_50_93_curated
PLM4_65_coex_sep16_scaffold_11483_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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1124..1324
DNA (201bp) protein (67aa)
MscS Mechanosensitive ion channel:Conserved TM helix bin=GWF2_Lentisphaerae_50_93 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
mechanosensitive ion channel protein MscS
Tax=GWF2_Lentisphaerae_50_93_curated
PLM4_65_coex_sep16_scaffold_11483_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1328..1861)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003700F9F
alkyl hydroperoxide reductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
PLM4_65_coex_sep16_scaffold_11483_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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1954..3246
DNA (1293bp) protein (431aa)
Patatin Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNI2_ACCPU
Patatin
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM4_65_coex_sep16_scaffold_11483_6
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3133..4488)
DNA (1356bp) protein (452aa)
Magnesium transporter Tax=Spiribacter salinus M19-40 RepID=R4V949_9GAMM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
magnesium transporter
PLM4_65_coex_sep16_scaffold_11483_7
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4561..5334)
DNA (774bp) protein (258aa)
UPF0042 nucleotide-binding protein Metme_0709 Tax=Methylomonas methanica (strain MC09) RepID=G0A4Y7_METMM
glmZ(sRNA)-inactivating NTPase
Nucleotide-binding protein Metme_0709 {ECO:0000256|HAMAP-Rule:MF_00636}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
PLM4_65_coex_sep16_scaffold_11483_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5449..5769)
DNA (321bp) protein (107aa)
ribosome hibernation promoting factor HPF Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371D0CE
sigma 54 modulation protein/30S ribosomal protein S30P
Sigma 54 modulation protein / SSU ribosomal protein S30P {ECO:0000313|EMBL:ACL71817.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM4_65_coex_sep16_scaffold_11483_9

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comp(5799..7247)
DNA (1449bp) protein (483aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase factor sigma-54 (Fragment) Tax=mine drainage metagenome RepID=T1B4I9_9ZZZZ
RNA polymerase factor sigma-54 {ECO:0000313|EMBL:EQD47724.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_65_coex_sep16_scaffold_11483_10
Idiomarina loihiensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7287..8015)
DNA (729bp) protein (243aa)
Unclassified ABC-type transport system, ATPase component Tax=Idiomarina loihiensis RepID=Q5R0J1_IDILO
ABC transporter ATPase
Unclassified ABC-type transport system, ATPase component {ECO:0000313|EMBL:AAV81240.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).;"
PLM4_65_coex_sep16_scaffold_11483_11
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8012..8587)
DNA (576bp) protein (192aa)
OstA-like protein Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12RZ3_SHEDO
OstA-like protein
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).;"
Displaying 11 items

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