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PLM4_65_coex_sep16_scaffold_589

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_589_1
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..254)
DNA (252bp) protein (84aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_01589};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
SAM-dependent methlyltransferase Tax=Methylococcus capsulatus RepID=UPI00030C6943
methyltransferase
PLM4_65_coex_sep16_scaffold_589_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293..1783)
DNA (1491bp) protein (497aa)
Glycosyl transferase family 39 Tax=mine drainage metagenome RepID=T1ALE6_9ZZZZ
glycosyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM4_65_coex_sep16_scaffold_589_3
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..4548)
DNA (2664bp) protein (888aa)
Glycosyl transferase family 2 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E5G1_9GAMM
exo-beta-1,3-glucanase
Tax=CG_Delta_01
PLM4_65_coex_sep16_scaffold_589_4
unknown

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comp(4652..5272)
DNA (621bp) protein (207aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_589_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5279..6976)
DNA (1698bp) protein (566aa)
WGS project CAIT00000000 data, contig 7 Tax=Fibrisoma limi BUZ 3 RepID=I2GLW9_9BACT
WGS project CAIT00000000 data, contig 7 {ECO:0000313|EMBL:CCH54895.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
symporter
PLM4_65_coex_sep16_scaffold_589_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7104..9248)
DNA (2145bp) protein (715aa)
hypothetical protein Tax=Thioalkalivibrio sp. AKL6 RepID=UPI00036B5811
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_coex_sep16_scaffold_589_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9381..9689)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Thiorhodovibrio sp. 970 RepID=H8Z4J4_9GAMM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM4_65_coex_sep16_scaffold_589_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9949..11193
DNA (1245bp) protein (415aa)
Non-specific serine/threonine protein kinase (Fragment) Tax=mine drainage metagenome RepID=T1CIN1_9ZZZZ
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_65_coex_sep16_scaffold_589_9
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11433..13655
DNA (2223bp) protein (741aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037044A0
Putative CheA signal transduction histidine kinase {ECO:0000313|EMBL:EIK46349.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
chemotaxis protein CheA
PLM4_65_coex_sep16_scaffold_589_10
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13690..14082
DNA (393bp) protein (131aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000365E09B
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EIK46348.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
response regulator receiver protein
PLM4_65_coex_sep16_scaffold_589_11
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14073..14525
DNA (453bp) protein (151aa)
hypothetical protein Tax=Vitreoscilla stercoraria RepID=UPI00036F8F8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ13147.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacter nodosus (strain VCS1703A).;"
PLM4_65_coex_sep16_scaffold_589_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14591..16492
DNA (1902bp) protein (634aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=M4NH60_9GAMM
Energy transducer TonB {ECO:0000313|EMBL:KJV31625.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_589_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16772..19330)
DNA (2559bp) protein (853aa)
ATP-dependent helicase Tax=Magnetospirillum gryphiswaldense RepID=V6F954_9PROT
hrpB; ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:CDL01371.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM4_65_coex_sep16_scaffold_589_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19485..20153
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45060.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_589_15
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20197..21969)
DNA (1773bp) protein (591aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9U803_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL36344.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
putative transmembrane signal peptide protein
PLM4_65_coex_sep16_scaffold_589_16
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21966..22520)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH21868.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
LemA family protein bin=GWF1_Xanthomonadales_69_6 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
lema family protein
PLM4_65_coex_sep16_scaffold_589_17
unknown

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comp(22528..23028)
DNA (501bp) protein (167aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_589_18
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23274..24497
DNA (1224bp) protein (408aa)
Uncharacterized protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z8A7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KEZ78265.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_589_19
unknown

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comp(24560..24889)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_589_20
unknown

Not on your lists

comp(24879..25289)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_589_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25349..26125)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Enterobacter cloacae subsp. cloacae ENHKU01 RepID=J7GJD3_ENTCL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_589_22
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26274..26546)
DNA (273bp) protein (91aa)
nucleoside-diphosphate sugar epimerase Tax=Novosphingobium sp. B-7 RepID=UPI0003B600F3
semialdehyde dehydrogenase family protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying 22 items

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