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PLM4_65_coex_sep16_scaffold_623

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_623_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..218
DNA (216bp) protein (72aa)
UPI0003CE48B1 related cluster Tax=unknown RepID=UPI0003CE48B1
Hydrogenase expression protein HypE {ECO:0000313|EMBL:ESW90117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
NADH-ubiquinone oxidoreductase chain 49kDa
PLM4_65_coex_sep16_scaffold_623_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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239..787
DNA (549bp) protein (183aa)
HyqI Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVT3_AZOC5
NADH ubiquinone oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_coex_sep16_scaffold_623_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(838..1080)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002D94FB2
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_coex_sep16_scaffold_623_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1130..3136
DNA (2007bp) protein (669aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit Tax=Rhodanobacter denitrificans RepID=M4NNL2_9GAMM
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89281.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PLM4_65_coex_sep16_scaffold_623_5
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3133..4083
DNA (951bp) protein (317aa)
formate hydrogenlyase Tax=Burkholderia pseudomallei RepID=UPI00016B14A7
putative membrane protein
Putative hydrogenase, membrane subunit {ECO:0000313|EMBL:EEC38333.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei 576.;"
PLM4_65_coex_sep16_scaffold_623_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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4087..4791
DNA (705bp) protein (235aa)
Hydrogenase 4 membrane component Tax=Sulfuricella denitrificans skB26 RepID=S6AAG8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_65_coex_sep16_scaffold_623_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4793..6250
DNA (1458bp) protein (486aa)
Hydrogenase 4 subunit F Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDN5_9GAMM
Hydrogenase 4 subunit F {ECO:0000313|EMBL:EIL97576.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
PLM4_65_coex_sep16_scaffold_623_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6252..7790
DNA (1539bp) protein (513aa)
Putative formate hydrogenlyase, subunit 5 Tax=Variovorax paradoxus B4 RepID=T1XKJ6_VARPD
putative formate hydrogenlyase, subunit 5
Putative formate hydrogenlyase, subunit 5 {ECO:0000313|EMBL:AGU53093.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
PLM4_65_coex_sep16_scaffold_623_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7800..8354
DNA (555bp) protein (185aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=Sulfuricella denitrificans skB26 RepID=S6ACT1_9PROT
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_coex_sep16_scaffold_623_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8392..9294
DNA (903bp) protein (301aa)
Spermidine synthase-like protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FB2_DECAR
spermidine synthase-like protein
Spermidine synthase-like protein {ECO:0000313|EMBL:AAZ46469.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
PLM4_65_coex_sep16_scaffold_623_11
unknown

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comp(9445..10641)
DNA (1197bp) protein (399aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10752..11060)
DNA (309bp) protein (103aa)
Transcriptional regulator, XRE family Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NP44_GRAMM
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEU38243.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
PLM4_65_coex_sep16_scaffold_623_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11318..11635)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XW06_ALCXX
FIG00954026: hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_coex_sep16_scaffold_623_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11632..11976)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI0003692B18
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_coex_sep16_scaffold_623_15
unknown

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comp(12268..12486)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_16
unknown

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13309..13866
DNA (558bp) protein (186aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14421..15695)
DNA (1275bp) protein (425aa)
Twin-arginine translocation pathway signal Tax=Sphingopyxis sp. MC1 RepID=N9W0B6_9SPHN
twin-arginine translocation pathway signal
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
PLM4_65_coex_sep16_scaffold_623_18
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15708..16541)
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Ralstonia solanacearum CFBP2957 RepID=D8NJH3_RALSL
putative ISRSO14-transposase orfB protein
Putative ISRSO14-transposase orfB protein {ECO:0000313|EMBL:CBJ43730.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
PLM4_65_coex_sep16_scaffold_623_19
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16829..18235)
DNA (1407bp) protein (469aa)
Cytochrome c Hsc Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T7F7_9DELT
cytochrome c
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
PLM4_65_coex_sep16_scaffold_623_20
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18327..18671)
DNA (345bp) protein (115aa)
Transcriptional regulator, LysR family Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZS6_HALHL
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM63188.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
PLM4_65_coex_sep16_scaffold_623_21
unknown

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comp(18921..19172)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_22
unknown

Not on your lists

comp(19186..19992)
DNA (807bp) protein (269aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19989..21173)
DNA (1185bp) protein (395aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4K7_GEOUR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ26725.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_623_24
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21195..21674)
DNA (480bp) protein (160aa)
ABC transporter related Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4Y1_GEODF
ABC transporter
ABC transporter, membrane and ATP-binding protein {ECO:0000313|EMBL:ACM21665.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_623_25
unknown

Not on your lists

comp(23005..23289)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_623_26
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23601..24152)
DNA (552bp) protein (184aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDT5_MICAI
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADL48818.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Displaying 26 items

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