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PLM4_65_coex_sep16_scaffold_1062

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1062_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..1830)
DNA (1590bp) protein (530aa)
Ferredoxin reductase bin=GWF1_Xanthomonadales_69_6 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
oxidoreductase FAD/NAD(P)-binding subunit
Tax=GWA2_Rhodocyclales_65_20_curated
PLM4_65_coex_sep16_scaffold_1062_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1899..3509
DNA (1611bp) protein (537aa)
Putative phosphoesterase Tax=Beggiatoa alba B18LD RepID=I3CL19_9GAMM
Putative phosphoesterase {ECO:0000313|EMBL:EIJ44312.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
putative phosphoesterase
PLM4_65_coex_sep16_scaffold_1062_3
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3510..4811)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000364DE84
ABC transporter-like protein
Tax=GWA2_Rhodocyclales_65_20_curated
PLM4_65_coex_sep16_scaffold_1062_4
unknown

Not on your lists

comp(4844..5368)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1062_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5344..6435)
DNA (1092bp) protein (364aa)
Uncharacterized protein Tax=Beggiatoa alba B18LD RepID=I3CL20_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM4_65_coex_sep16_scaffold_1062_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6530..6925)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G6L8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM78495.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1062_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7055..7462)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Beggiatoa alba B18LD RepID=I3CJZ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ43936.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1062_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7603..9012)
DNA (1410bp) protein (470aa)
Serine/threonine protein kinase Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1W1_9GAMM
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_65_coex_sep16_scaffold_1062_9
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9177..9959)
DNA (783bp) protein (261aa)
RNA polymerase sigma factor FliA Tax=Azoarcus sp. (strain BH72) RepID=A1K4G9_AZOSB
fliA; RNA polymerase sigma factor
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM4_65_coex_sep16_scaffold_1062_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10327..12561)
DNA (2235bp) protein (745aa)
Putative uncharacterized protein Tax=Janthinobacterium lividum RepID=A1X1M8_9BURK
Signal peptide protein {ECO:0000313|EMBL:KHA77586.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
diguanylate cyclase domain protein
PLM4_65_coex_sep16_scaffold_1062_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12800..13765
DNA (966bp) protein (322aa)
Two-component response regulator Tax=Azospirillum sp. (strain B510) RepID=D3NXV5_AZOS1
two-component response regulator
Tax=GWA2_Curvibacter_64_110_curated
PLM4_65_coex_sep16_scaffold_1062_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13791..14648)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003801462
diguanylate phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_coex_sep16_scaffold_1062_13
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14772..17657
DNA (2886bp) protein (962aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Multi-sensor signal transduction histidine kinase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP22_ACCPU
multi-sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1062_14
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17761..18546
DNA (786bp) protein (262aa)
Putative uncharacterized protein Tax=Magnetospirillum gryphiswaldense RepID=A4TZ42_9PROT
Conserved exported protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM4_65_coex_sep16_scaffold_1062_15
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18543..20123
DNA (1581bp) protein (527aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Multi-sensor signal transduction histidine kinase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRF6_ACCPU
multi-sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_1062_16
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20086..20550)
DNA (465bp) protein (155aa)
globin Tax=Aquimarina agarilytica RepID=UPI000289948C
hemoglobin-like protein (Hmp)
Hemoglobin-like protein (Hmp) {ECO:0000313|EMBL:EON21046.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM4_65_coex_sep16_scaffold_1062_17
unknown

Not on your lists

comp(20566..20673)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1062_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20874..22412
DNA (1539bp) protein (513aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI00036A3909
signal transduction histidine kinase
Tax=CG_Rhodocyc_01
PLM4_65_coex_sep16_scaffold_1062_19
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22420..23076
DNA (657bp) protein (219aa)
LuxR family transcriptional regulator Tax=Rhodocyclaceae RepID=UPI00037F05A0
citB2; LuxR family transcriptional regulator
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ABR89925.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
PLM4_65_coex_sep16_scaffold_1062_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23215..23421
DNA (207bp) protein (69aa)
Anti-sigma-28 factor, FlgM Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F1_NITMU
anti-sigma-28 factor FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:ABB74620.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM4_65_coex_sep16_scaffold_1062_21
unknown

Not on your lists

24170..24460
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1062_22
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

24531..25178
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YWQ7_9PSEU
Conserved putative membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_1062_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25243..27378)
DNA (2136bp) protein (712aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI000381C3F8
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_coex_sep16_scaffold_1062_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27904..29247
DNA (1344bp) protein (448aa)
3-carboxy-cis,cis-muconate cycloisomerase Tax=Citrobacter sp. 30_2 RepID=C1M996_9ENTR
3-carboxy-cis,cis-muconate cycloisomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_coex_sep16_scaffold_1062_25
unknown

Not on your lists

29288..29383
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 25 items

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