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PLM4_65_coex_sep16_scaffold_1393

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1393_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1393_2
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(309..1358)
DNA (1050bp) protein (350aa)
leucine dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B334B8
Leucine dehydrogenase {ECO:0000313|EMBL:KFL37694.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
leucine dehydrogenase
PLM4_65_coex_sep16_scaffold_1393_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1505..4990
DNA (3486bp) protein (1162aa)
Methylmalonyl-CoA mutase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6E7_CONWI
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AJC45447.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
PLM4_65_coex_sep16_scaffold_1393_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6224..6826
DNA (603bp) protein (201aa)
RNA-directed DNA polymerase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RNA-directed DNA polymerase
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_65_coex_sep16_scaffold_1393_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7124..9409
DNA (2286bp) protein (762aa)
aldehyde dehydrogenase (EC:1.2.99.3)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI000377D519
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ACY47485.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM4_65_coex_sep16_scaffold_1393_6
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9588..11657)
DNA (2070bp) protein (690aa)
Putative uncharacterized protein Tax=Xanthomonas campestris pv. campestris (strain 8004) RepID=Q4UXH9_XANC8
Uncharacterized protein {ECO:0000313|EMBL:KFN47314.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1393_7
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11809..12261
DNA (453bp) protein (151aa)
hypothetical protein Tax=Spirulina subsalsa RepID=UPI000314FA4A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY75807.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
PLM4_65_coex_sep16_scaffold_1393_8
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12264..13253
DNA (990bp) protein (330aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037EC963
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:KFB72763.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1393_9
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13250..13855)
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AC14_ALKEH
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM4_65_coex_sep16_scaffold_1393_10
unknown

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13916..14857
DNA (942bp) protein (314aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1393_11
unknown

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comp(15038..16042)
DNA (1005bp) protein (335aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1393_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16060..16539
DNA (480bp) protein (160aa)
Putative diamine acetyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A7_GEMAT
putative diamine acetyltransferase
Putative diamine acetyltransferase {ECO:0000313|EMBL:BAH38117.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_coex_sep16_scaffold_1393_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16455..17102)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B64F72
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
PLM4_65_coex_sep16_scaffold_1393_14

Not on your lists

17314..17772
DNA (459bp) protein (153aa)
Marine sediment metagenome DNA, contig: S01H1_S30956 {ECO:0000313|EMBL:GAG35938.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_1393_15
unknown

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comp(17812..18021)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1393_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18030..19181)
DNA (1152bp) protein (384aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNU9_MARHT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_1393_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(19209..20138)
DNA (930bp) protein (310aa)
phenazine biosynthesis protein PhzF family protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
phenazine biosynthesis protein PhzF family
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_1393_18
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20135..21991)
DNA (1857bp) protein (619aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000344926B
degV family protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
PLM4_65_coex_sep16_scaffold_1393_19
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21988..22695)
DNA (708bp) protein (236aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
general secretion pathway protein B
Tax=GWF1_Xanthomonadales_69_6_curated
PLM4_65_coex_sep16_scaffold_1393_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22698..24311)
DNA (1614bp) protein (538aa)
General secretion pathway protein A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT
exeA; General secretion pathway protein A
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM4_65_coex_sep16_scaffold_1393_21
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(24432..25019)
DNA (588bp) protein (196aa)
DNA polymerase IV Tax=Dehalococcoides sp. (strain VS) RepID=D2BJX9_DEHSV
dinP; DNA polymerase IV (Y-family)
Tax=RBG_16_Chloroflexi_64_43_curated
Displaying 21 items

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