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PLM4_65_coex_sep16_scaffold_2246

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2246_1
unknown

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comp(2..130)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2246_2
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(96..293)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI01867.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_2246_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(350..1132)
DNA (783bp) protein (261aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Succinate dehydrogenase subunit B Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A903_ALKEH
PLM4_65_coex_sep16_scaffold_2246_4
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1166..2953)
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5Y1_9GAMM
PLM4_65_coex_sep16_scaffold_2246_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2950..3348)
DNA (399bp) protein (133aa)
succinate dehydrogenase Tax=Nevskia ramosa RepID=UPI0003B5076E
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative {ECO:0000313|EMBL:EDP62792.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
succinate dehydrogenase, hydrophobic membrane anchor protein
PLM4_65_coex_sep16_scaffold_2246_6
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3345..3743)
DNA (399bp) protein (133aa)
succinate dehydrogenase Tax=Fodinicurvata sediminis RepID=UPI0003B2F038
succinate dehydrogenase
Succinate dehydrogenase {ECO:0000313|EMBL:AHK79540.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
PLM4_65_coex_sep16_scaffold_2246_7
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3957..4877
DNA (921bp) protein (307aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI0003813645
folate-binding protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_65_coex_sep16_scaffold_2246_8
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4906..5724)
DNA (819bp) protein (273aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
Glutamate racemase Tax=Desulfovibrio vulgaris RepID=A1VFK2_DESVV
PLM4_65_coex_sep16_scaffold_2246_9
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5737..7236)
DNA (1500bp) protein (500aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
Lysine--tRNA ligase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60C10_METCA
lysyl-tRNA synthetase
PLM4_65_coex_sep16_scaffold_2246_10
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7429..8241)
DNA (813bp) protein (271aa)
Peptide chain release factor 2 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRJ1_THISH
peptide chain release factor 2
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM4_65_coex_sep16_scaffold_2246_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8555..10270)
DNA (1716bp) protein (572aa)
ssDNA exonuclease RecJ Tax=Erwinia toletana RepID=UPI00034809AF
single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AGB83839.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens FGI94.;"
PLM4_65_coex_sep16_scaffold_2246_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10267..11307)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00035CD230
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_2246_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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11346..11726
DNA (381bp) protein (127aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003765711
Uncharacterized protein {ECO:0000313|EMBL:CDH43306.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
Displaying 13 items

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