ggKbase home page

PLM4_65_coex_sep16_scaffold_2910

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2910_1

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)
Host cell attachment-required protein Tax=mine drainage metagenome RepID=T0YG94_9ZZZZ
Host cell attachment-required protein {ECO:0000313|EMBL:EQD30867.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_65_coex_sep16_scaffold_2910_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

427..2322
DNA (1896bp) protein (632aa)
ATP-dependent zinc metalloprotease FtsH Tax=Ralstonia pickettii DTP0602 RepID=U3QSX2_RALPI
cell division protein FtsH
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_coex_sep16_scaffold_2910_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2329..2727)
DNA (399bp) protein (133aa)
conjugal transfer protein TraR Tax=Methylohalobius crimeensis RepID=UPI0003B45427
dksA_[C]; C4-type zinc finger protein, DksA/TraR family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_coex_sep16_scaffold_2910_4
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2741..4360)
DNA (1620bp) protein (540aa)
60 kDa chaperonin Tax=Lutibaculum baratangense AMV1 RepID=V4THE8_9RHIZ
groEL; molecular chaperone GroEL
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
PLM4_65_coex_sep16_scaffold_2910_5
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..4659)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RRT1_ALLVD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM4_65_coex_sep16_scaffold_2910_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4772..6082)
DNA (1311bp) protein (437aa)
Glucose-1-phosphate adenylyltransferase Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YGX2_METFJ
glucose-1-phosphate adenylyltransferase
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_2910_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6219..7946
DNA (1728bp) protein (576aa)
putative DNA-directed DNA polymerase (EC:2.7.7.7)
Putative DNA-directed DNA polymerase, family X, modulated with phosphoesterase domain {ECO:0000313|EMBL:CBK43520.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK43520.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative DNA-directed DNA polymerase, family X, modulated with phosphoesterase domain Tax=Candidatus Nitrospira defluvii RepID=D8PJE6_9BACT
PLM4_65_coex_sep16_scaffold_2910_8

Not on your lists

comp(8017..8271)
DNA (255bp) protein (85aa)
Phosphopantetheine-binding protein Tax=mine drainage metagenome RepID=T1B858_9ZZZZ
Phosphopantetheine-binding protein {ECO:0000313|EMBL:EQD50405.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphopantetheine-binding protein
PLM4_65_coex_sep16_scaffold_2910_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8306..9424)
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036EA745
pdhC; Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase (E2) component
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_coex_sep16_scaffold_2910_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9421..10413)
DNA (993bp) protein (331aa)
pyruvate dehydrogenase subunit beta Tax=Elioraea tepidiphila RepID=UPI000376C542
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_coex_sep16_scaffold_2910_11
unknown

Not on your lists

comp(10410..10496)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 11 items

View Taxonomy