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PLM4_65_coex_sep16_scaffold_5712

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5712_1
unknown

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comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5712_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(69..245)
DNA (177bp) protein (59aa)
N-6 DNA methylase Tax=Caldithrix abyssi DSM 13497 RepID=H1XSS3_9BACT
type I restriction-modification system DNA adenine N6-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_coex_sep16_scaffold_5712_3
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(889..1116)
DNA (228bp) protein (76aa)
formate dehydrogenase subunit delta (EC:1.2.1.2)
Formate dehydrogenase, delta subunit {ECO:0000313|EMBL:AAU92355.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AAU92355.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Formate dehydrogenase, delta subunit Tax=Methylococcus capsulatus RepID=Q608V0_METCA
PLM4_65_coex_sep16_scaffold_5712_4
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1127..1942)
DNA (816bp) protein (272aa)
formate dehydrogenase accessory protein FdhD Tax=Herbaspirillum lusitanum RepID=UPI0002F3CD69
fdsC; NAD-linked formate dehydrogenase, molybdenum containing, accessory protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PLM4_65_coex_sep16_scaffold_5712_5
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1926..4775)
DNA (2850bp) protein (950aa)
fdhF; formate dehydrogenase H (EC:1.2.1.2)
formate dehydrogenase subunit alpha Tax=Dyella ginsengisoli RepID=UPI00034CE6D5
Formate dehydrogenase {ECO:0000313|EMBL:KGD94108.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
PLM4_65_coex_sep16_scaffold_5712_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4787..6325)
DNA (1539bp) protein (513aa)
NADH dehydrogenase Tax=Azoarcus sp. KH32C RepID=H0Q598_9RHOO
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:BAL27161.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
PLM4_65_coex_sep16_scaffold_5712_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6339..6818)
DNA (480bp) protein (160aa)
formate dehydrogenase subunit gamma Tax=Methylohalobius crimeensis RepID=UPI0003B33D2F
Formate dehydrogenase {ECO:0000313|EMBL:KGI79050.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
PLM4_65_coex_sep16_scaffold_5712_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6973..7677
DNA (705bp) protein (235aa)
Conserved hypothetical integral membrane protein Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TL29_ALKMQ
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:ABR46897.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Displaying 8 items

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