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PLM4_65_coex_sep16_scaffold_5768

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5768_1
unknown

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comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5768_2
unknown

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comp(543..779)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5768_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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815..1570
DNA (756bp) protein (252aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MatE family protein
MatE family protein {ECO:0000313|EMBL:BAH39348.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_coex_sep16_scaffold_5768_trna_1
unknown

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comp(1588..1676)
DNA (89bp)
transferRNA Ser
PLM4_65_coex_sep16_scaffold_5768_4
unknown

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comp(1748..2050)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5768_5
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2065..2958)
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YLF4_METFJ
PLM4_65_coex_sep16_scaffold_5768_6

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3204..3734
DNA (531bp) protein (177aa)
Amino acid-binding ACT domain-containing protein Tax=uncultured bacterium RepID=I7FKJ9_9BACT
Amino acid-binding ACT domain-containing protein {ECO:0000313|EMBL:AFP20561.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amino acid-binding ACT domain-containing protein
PLM4_65_coex_sep16_scaffold_5768_7

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3734..4207
DNA (474bp) protein (158aa)
Bacterioferritin comigratory protein Tax=mine drainage metagenome RepID=T1A026_9ZZZZ
Bacterioferritin comigratory protein {ECO:0000313|EMBL:EQD35145.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
PLM4_65_coex_sep16_scaffold_5768_8
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4204..5634
DNA (1431bp) protein (477aa)
phosphate starvation protein PhoH Tax=Thioalkalivibrio RepID=UPI00037E2F1B
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ADC70928.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
PLM4_65_coex_sep16_scaffold_5768_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5714..7207
DNA (1494bp) protein (498aa)
peptidase M48 Ste24p Tax=Methylococcus capsulatus RepID=UPI00036ECD38
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_65_coex_sep16_scaffold_5768_10
Sutterella parvirubra, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7325..7666
DNA (342bp) protein (114aa)
VacJ-like protein Tax=Sutterella parvirubra YIT 11816 RepID=H3KBM9_9BURK
VacJ-like protein {ECO:0000313|EMBL:EHY32515.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella parvirubra YIT 11816.;"
putative VacJ-like lipoprotein
Displaying 11 items

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