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PLM4_65_coex_sep16_scaffold_15568

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_15568_1

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comp(1..543)
DNA (543bp) protein (181aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Fragment) Tax=mine drainage metagenome RepID=T0YT79_9ZZZZ
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000313|EMBL:EQD36378.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glutamyl-tRNA(Gln) amidotransferase subunit B
PLM4_65_coex_sep16_scaffold_15568_2
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(543..2036)
DNA (1494bp) protein (498aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4B3_9GAMM
PLM4_65_coex_sep16_scaffold_15568_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2113..2403)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Beggiatoa alba B18LD RepID=I3CG00_9GAMM
glutamyl-tRNA(Gln) amidotransferase subunit C
PLM4_65_coex_sep16_scaffold_15568_4
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2543..3586
DNA (1044bp) protein (348aa)
Rod shape-determining protein MreB Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CK6_METCA
mreB; rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:AAU90720.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM4_65_coex_sep16_scaffold_15568_5

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3716..4105
DNA (390bp) protein (130aa)
Cell shape-determining protein MreC Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWA3_NITHN
Rod shape-determining protein MreC {ECO:0000313|EMBL:AIA18946.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rod shape-determining protein MreC
PLM4_65_coex_sep16_scaffold_15568_6
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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4072..4275
DNA (204bp) protein (68aa)
Cell shape-determining protein MreC Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BQ54_9GAMM
Rod shape-determining protein MreC {ECO:0000313|EMBL:AKH22290.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
rod shape-determining protein MreC
PLM4_65_coex_sep16_scaffold_15568_7

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4272..4751
DNA (480bp) protein (160aa)
Cell shape-determining protein MreD Tax=mine drainage metagenome RepID=T1AG99_9ZZZZ
Cell shape-determining protein MreD {ECO:0000313|EMBL:EQD40044.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rod shape-determining protein MreD
PLM4_65_coex_sep16_scaffold_15568_8
unknown

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comp(4808..4945)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 8 items

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