ggKbase home page

PLM4_65_coex_sep16_scaffold_12241

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_12241_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..616
DNA (615bp) protein (205aa)
Amidohydrolase family protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IS59_RHOCS
amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:ACI98295.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_coex_sep16_scaffold_12241_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

618..1583
DNA (966bp) protein (322aa)
mandelate racemase Tax=Xanthobacteraceae RepID=UPI00036AB561
putative mandelate racemase/muconate lactonizing enzyme
Putative mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:CBS86024.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM4_65_coex_sep16_scaffold_12241_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1626..2954
DNA (1329bp) protein (443aa)
Amino acid/peptide transporter Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDZ1_PHEZH
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ACG78424.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_65_coex_sep16_scaffold_12241_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2839..4335)
DNA (1497bp) protein (499aa)
Putative esterase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027P2_SOLUE
esterase
Putative esterase {ECO:0000313|EMBL:ABJ82765.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_coex_sep16_scaffold_12241_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4382..5497)
DNA (1116bp) protein (372aa)
Ferri-bacillibactin esterase BesA {ECO:0000313|EMBL:EYR82167.1}; EC=3.1.-.- {ECO:0000313|EMBL:EYR82167.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ferri-bacillibactin esterase BesA Tax=Shinella zoogloeoides DD12 RepID=V5ENA1_9RHIZ
IroE-like esterase
PLM4_65_coex_sep16_scaffold_12241_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5488..7434)
DNA (1947bp) protein (649aa)
beta-lactamase Tax=Maricaulis sp. JL2009 RepID=UPI0003A43244
beta-lactamase class C
Beta-lactamase class C {ECO:0000313|EMBL:ACG77277.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_65_coex_sep16_scaffold_12241_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7535..8893
DNA (1359bp) protein (453aa)
Beta-lactamase Tax=Rhodanobacter spathiphylli B39 RepID=I4W3M0_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL94061.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-lactamase
PLM4_65_coex_sep16_scaffold_12241_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8893..9438
DNA (546bp) protein (182aa)
Beta-lactamase Tax=Rhodanobacter fulvus Jip2 RepID=I4VZX4_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL92765.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
beta-lactamase
PLM4_65_coex_sep16_scaffold_12241_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9465..10079)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Sphingobium lactosutens DS20 RepID=T0IZ35_9SPHN
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AJA07124.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
PLM4_65_coex_sep16_scaffold_12241_10
bacterium YEK0313, Bacteria

Not on your lists

10157..11125
DNA (969bp) protein (323aa)
Oxidoreductase, zinc-binding dehydrogenase family Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI99_TISMK
Phthiocerol synthesis polyketide synthase type I PpsC {ECO:0000313|EMBL:CEJ14794.1}; species="Bacteria.;" source="bacterium YEK0313.;"
oxidoreductase, zinc-binding dehydrogenase family
PLM4_65_coex_sep16_scaffold_12241_11
unknown

Not on your lists

comp(11228..11554)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_12241_12
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12048..12953
DNA (906bp) protein (302aa)
AMP-dependent synthetase and ligase Tax=Thauera sp. (strain MZ1T) RepID=C4K9L9_THASP
feruloyl-CoA synthase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACR01095.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
PLM4_65_coex_sep16_scaffold_12241_13
Nocardioides sp. KP7, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12946..13794)
DNA (849bp) protein (283aa)
Dihydrodiol dehydrogenase Tax=Nocardioides sp. (strain KP7) RepID=Q9LC88_NOCSK
Dihydrodiol dehydrogenase {ECO:0000313|EMBL:BAA94705.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain KP7).;"
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
PLM4_65_coex_sep16_scaffold_12241_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13797..14360)
DNA (564bp) protein (188aa)
Aromatic-ring-hydroxylating dioxygenase beta subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7A1_CONWI
aromatic-ring-hydroxylating dioxygenase subunit beta
Aromatic-ring-hydroxylating dioxygenase beta subunit {ECO:0000313|EMBL:ADB48872.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_65_coex_sep16_scaffold_12241_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14357..15643)
DNA (1287bp) protein (429aa)
Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7A0_CONWI
Aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein {ECO:0000313|EMBL:ADB48871.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_65_coex_sep16_scaffold_12241_16
Acinetobacter rudis, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15664..15855)
DNA (192bp) protein (64aa)
Dioxygenase ferredoxin subunit Tax=Acinetobacter rudis CIP 110305 RepID=S3MQR4_9GAMM
Dioxygenase ferredoxin subunit {ECO:0000313|EMBL:EPF70205.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter rudis CIP 110305.;"
hcaC; 3-phenylpropionate dioxygenase ferredoxin subunit
Displaying 16 items

View Taxonomy