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PLM4_65_coex_sep16_scaffold_16720

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_16720_1
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..187
DNA (186bp) protein (62aa)
Sugar phosphate permease Tax=Polaromonas sp. CF318 RepID=J2KAZ5_9BURK
Sugar phosphate permease {ECO:0000313|EMBL:EJL77420.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
major facilitator transporter
PLM4_65_coex_sep16_scaffold_16720_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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381..1337
DNA (957bp) protein (319aa)
Cytochrome c family protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T1D3_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:EIT67725.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
cytochrome C
PLM4_65_coex_sep16_scaffold_16720_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1342..3219
DNA (1878bp) protein (626aa)
Copper-translocating P-type ATPase 2 {ECO:0000313|EMBL:EIK91441.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EIK91441.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Copper-translocating P-type ATPase 2 Tax=cellular organisms RepID=I4MQF1_9BURK
copF; Copper-transporting P-type ATPase
PLM4_65_coex_sep16_scaffold_16720_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3216..3461
DNA (246bp) protein (82aa)
Copper-transporting P-type ATPase Tax=Curvibacter lanceolatus RepID=UPI0003753E13
cation-transporting ATPase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
PLM4_65_coex_sep16_scaffold_16720_5
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3827..4096
DNA (270bp) protein (90aa)
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:GAO33962.1}; EC=3.1.4.52 {ECO:0000313|EMBL:GAO33962.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
Uncharacterized protein Tax=Sinorhizobium meliloti (strain SM11) RepID=Q1WLB1_SINMM
hypothetical protein
PLM4_65_coex_sep16_scaffold_16720_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4164..4409
DNA (246bp) protein (82aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI00038151CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24109.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
PLM4_65_coex_sep16_scaffold_16720_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4451..4783)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KDP87244.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
PLM4_65_coex_sep16_scaffold_16720_8

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5141..5419
DNA (279bp) protein (93aa)
RNP-1 like RNA-binding protein Tax=mine drainage metagenome RepID=T1BVU3_9ZZZZ
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EQD74002.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNP-1 like RNA-binding protein
PLM4_65_coex_sep16_scaffold_16720_9
unknown

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5482..5757
DNA (276bp) protein (92aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_16720_10
unknown

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5754..5891
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_16720_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5888..6400)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIK9_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AKF86986.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_16720_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6401..7180)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00037A9B6B
NIPSNAP family containing protein {ECO:0000313|EMBL:KGQ18371.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_16720_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7251..7484
DNA (234bp) protein (78aa)
transcriptional regulator Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625E2B
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:CCF82476.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Displaying 13 items

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