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PLM4_65_coex_sep16_scaffold_6077

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6077_1

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1..555
DNA (555bp) protein (185aa)
Acetyl-CoA carboxylase biotin carboxylase subunit (Fragment) Tax=mine drainage metagenome RepID=T0YYL5_9ZZZZ
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:EQD38128.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acetyl-CoA carboxylase, biotin carboxylase
PLM4_65_coex_sep16_scaffold_6077_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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654..1523
DNA (870bp) protein (290aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=PRMA_METCA
PLM4_65_coex_sep16_scaffold_6077_3
Pseudomonas sp. Chol1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1526..2869
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Pseudomonas sp. Chol1 RepID=K5YJR4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EKM95473.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Chol1.;"
zinc finger-domain-containing protein
PLM4_65_coex_sep16_scaffold_6077_4
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2884..3906
DNA (1023bp) protein (341aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
tRNA-dihydrouridine synthase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUV0_THISH
nifR3 family TIM-barrel protein
PLM4_65_coex_sep16_scaffold_6077_5

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3957..4244
DNA (288bp) protein (96aa)
DNA-binding protein Fis Tax=mine drainage metagenome RepID=T0Z963_9ZZZZ
DNA-binding protein Fis {ECO:0000313|EMBL:EQD40592.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-binding protein Fis
PLM4_65_coex_sep16_scaffold_6077_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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4322..5893
DNA (1572bp) protein (524aa)
IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000363D908
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
PLM4_65_coex_sep16_scaffold_6077_7
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6082..7278
DNA (1197bp) protein (399aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
phosphoribosylamine--glycine ligase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000374E1D2
PLM4_65_coex_sep16_scaffold_6077_8

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comp(7333..8616)
DNA (1284bp) protein (428aa)
Outer membrane efflux protein (Fragment) Tax=mine drainage metagenome RepID=T0Z1B5_9ZZZZ
Outer membrane efflux protein {ECO:0000313|EMBL:EQD41741.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
outer membrane efflux protein
PLM4_65_coex_sep16_scaffold_6077_9
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8671..11805)
DNA (3135bp) protein (1045aa)
multidrug transporter AcrB Tax=Azoarcus toluclasticus RepID=UPI000381F68D
Acriflavin resistance protein {ECO:0000313|EMBL:EXJ16018.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
acriflavin resistance protein
PLM4_65_coex_sep16_scaffold_6077_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11802..12857)
DNA (1056bp) protein (352aa)
RND transporter Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003778680
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM4_65_coex_sep16_scaffold_6077_11

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comp(12877..13080)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BT57_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD71718.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_6077_12
Acinetobacter calcoaceticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13346..13999)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Hirschia maritima RepID=UPI000377EFBF
Uncharacterized protein {ECO:0000313|EMBL:GAM30728.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus.;"
PLM4_65_coex_sep16_scaffold_6077_13
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14077..14226)
DNA (150bp) protein (50aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
transcription termination factor Rho Tax=Arhodomonas aquaeolei RepID=UPI00035DE8D2
rho; transcription termination factor Rho
Displaying 13 items

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