ggKbase home page

PLM4_65_coex_sep16_scaffold_4726

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4726_1
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:KGC13596.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
PLM4_65_coex_sep16_scaffold_4726_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

514..2076
DNA (1563bp) protein (521aa)
DNA polymerase III subunit tau Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FBW6_9GAMM
DNA polymerase III subunit gamma/tau
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_4726_3
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2091..2414
DNA (324bp) protein (108aa)
Nucleoid-associated protein Tgr7_1074 Tax=Thioalkalivibrio RepID=B8GPJ4_THISH
hypothetical protein
Nucleoid-associated protein Tgr7_1074 {ECO:0000256|HAMAP-Rule:MF_00274}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM4_65_coex_sep16_scaffold_4726_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2443..3045
DNA (603bp) protein (201aa)
Recombination protein RecR Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RECR_ALKEH
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
recR; recombination protein RecR
PLM4_65_coex_sep16_scaffold_4726_5
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3077..4030)
DNA (954bp) protein (318aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
Putative ribosome biogenesis GTPase RsgA Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5B9_9GAMM
GTPase RsgA
PLM4_65_coex_sep16_scaffold_4726_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4027..5289)
DNA (1263bp) protein (421aa)
Ste24 endopeptidase (EC:3.4.24.84)
Ste24 endopeptidase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1A2_NITHN
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_coex_sep16_scaffold_4726_7
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5345..5917
DNA (573bp) protein (191aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
Oligoribonuclease Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RR07_ALLVD
Exonuclease RNase T and DNA polymerase III
PLM4_65_coex_sep16_scaffold_4726_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5933..6907
DNA (975bp) protein (325aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta Tax=Sphingomonas sp. MM-1 RepID=M4S0S6_9SPHN
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:AGH49381.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
PLM4_65_coex_sep16_scaffold_4726_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6904..7539
DNA (636bp) protein (212aa)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00036396D0
DSBA oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_65_coex_sep16_scaffold_4726_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7536..7931
DNA (396bp) protein (132aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035D3BF2
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:KGQ17907.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glutathione-dependent formaldehyde-activating, GFA
Displaying 10 items

View Taxonomy