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PLM4_65_coex_sep16_scaffold_8765

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8765_1
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..700)
DNA (699bp) protein (233aa)
ABC transporter involved in Fe-S cluster assembly protein SufD Tax=Azospirillum brasilense Sp245 RepID=G8AQC0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KIF83975.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Fe-S cluster assembly protein SufD
PLM4_65_coex_sep16_scaffold_8765_2
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(697..1461)
DNA (765bp) protein (255aa)
FeS assembly ATPase SufC Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1D1_9PROT
FeS assembly ATPase SufC
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_65_coex_sep16_scaffold_8765_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1465..2913)
DNA (1449bp) protein (483aa)
FeS assembly protein SufB Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWY7_NITHN
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:ADE13868.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM4_65_coex_sep16_scaffold_8765_4
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2941..3318)
DNA (378bp) protein (126aa)
Predicted transcriptional regulator Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5H311_XANOR
hypothetical protein
Predicted transcriptional regulator {ECO:0000313|EMBL:AAW74660.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
PLM4_65_coex_sep16_scaffold_8765_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3730..4755
DNA (1026bp) protein (342aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Fructose-bisphosphate aldolase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIQ9_THIDA
PLM4_65_coex_sep16_scaffold_8765_6
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4784..5638
DNA (855bp) protein (285aa)
organic solvent ABC transporter ATP-binding protein Tax=Methylohalobius crimeensis RepID=UPI0003B32D70
ABC transporter
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM4_65_coex_sep16_scaffold_8765_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5635..6405
DNA (771bp) protein (257aa)
Putative integral membrane protein Tax=Polaromonas sp. CF318 RepID=J2U098_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJL84512.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_8765_8

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6424..6939
DNA (516bp) protein (172aa)
Mammalian cell entry related domain protein (Fragment) Tax=mine drainage metagenome RepID=T0ZPG4_9ZZZZ
organic solvent resistance ABC transporter substrate-binding protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EQD46548.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_65_coex_sep16_scaffold_8765_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6936..7655
DNA (720bp) protein (240aa)
ABC-type transport system involved in resistance to organic solvents, auxiliary component Tax=Rhodanobacter denitrificans RepID=I4WVY0_9GAMM
ABC-type transport system involved in resistance to organic solvents, auxiliary component
ABC-type transport system involved in resistance to organic solvents, auxiliary component {ECO:0000313|EMBL:AGG90420.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PLM4_65_coex_sep16_scaffold_8765_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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7652..8038
DNA (387bp) protein (129aa)
Sulfate transporter/antisigma-factor antagonist STAS Tax=Nitrosococcus oceani RepID=Q3J7G6_NITOC
sulfate transporter/antisigma-factor antagonist STAS
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM4_65_coex_sep16_scaffold_8765_11
Pseudomonas cremoricolorata, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8065..8712)
DNA (648bp) protein (216aa)
ABC transporter Tax=Thioalkalivibrio sp. ALJ16 RepID=UPI000372E2E6
membrane protein
Membrane protein {ECO:0000313|EMBL:AIR90290.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremoricolorata.;"
Displaying 11 items

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