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PLM4_65_coex_sep16_scaffold_8898

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8898_1

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2..271
DNA (270bp) protein (90aa)
Nucleotidyltransferase family protein (Fragment) Tax=mine drainage metagenome RepID=T1AU59_9ZZZZ
Nucleotidyltransferase family protein {ECO:0000313|EMBL:EQD60982.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
PLM4_65_coex_sep16_scaffold_8898_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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295..960
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAV4_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78005.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_65_coex_sep16_scaffold_8898_3
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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962..2059
DNA (1098bp) protein (366aa)
lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
radical SAM protein Tax=Arhodomonas aquaeolei RepID=UPI0003642CCA
PLM4_65_coex_sep16_scaffold_8898_4
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2070..2726
DNA (657bp) protein (219aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyltransferase; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
Octanoyltransferase Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXR6_PSEMN
lipoate-protein ligase B
PLM4_65_coex_sep16_scaffold_8898_5

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comp(2745..3122)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BRM7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD71203.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_8898_6
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3304..3597)
DNA (294bp) protein (98aa)
Protein containing DUF493 (Fragment) Tax=mine drainage metagenome RepID=T1ATB8_9ZZZZ
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
PLM4_65_coex_sep16_scaffold_8898_7
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3668..4549)
DNA (882bp) protein (294aa)
D-alanine aminotransferase Tax=Alcanivorax pacificus W11-5 RepID=K2GSI0_9GAMM
d-alanine aminotransferase
D-alanine aminotransferase {ECO:0000313|EMBL:AJD49148.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
PLM4_65_coex_sep16_scaffold_8898_8
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4564..5568)
DNA (1005bp) protein (335aa)
Beta-lactamase, putative Tax=Methylophaga thiooxydans DMS010 RepID=C0N758_9GAMM
Beta-lactamase, putative {ECO:0000313|EMBL:EEF79207.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans DMS010.;"
D-alanyl-D-alanine carboxypeptidase
Displaying 8 items

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