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PLM4_65_coex_sep16_scaffold_1060_9

Organism: PLM4_65_coex_sep16Gammaproteobacteria_66_10

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 9 / 38
Location: comp(10442..11671)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter MFP subunit Tax=Pseudomonas moraviensis R28 RepID=V8R6C1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 368.0
  • Bit_score: 387
  • Evalue 8.80e-105
RND transporter MFP subunit {ECO:0000313|EMBL:KIF59857.1}; Strain MEP34 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIP90809.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 368.0
  • Bit_score: 387
  • Evalue 1.20e-104
multidrug efflux RND membrane fusion protein MexE similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 373.0
  • Bit_score: 386
  • Evalue 5.60e-105

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGCTCTTTTCAATACTGACGTCTTCCGGACGTATCGCCCTCGGCTTTGCCGTCGTGCTTGCAGCATTGCTCGCCGCTGGCTGCGGGCCGGAAGCGGCGCCCGCCCCGCAGGCCATGCCGGTCACCGTATCCACGGTGCTCGAGCGCGAGGTGGCGGAATGGGACGAATTCACCGGGCGCCTGCGCGCCATCGATTCGGTGGAGATCCGCCCGCGCGTCTCCGGTTACATCGACCGCATCGCCTTTCACGAGGGCGGCGACGTCAAGAAGGGCGACCTGCTCTTCGTCATCGACCCCAAGCCCTTCCAGGCGGAGTTGCAGCGCGCCGAGGCGCAGGTGTCCTCGGCCCGTGCCCAGGCCCAGCTCGCCCGGCAGATGCGCGTGAACGCGGAGAAGCTGCGCAGCTCCGGCGCCATCTCGCAGGACGAATTCGATGAGCGCGCGAGCGCCGACGCGGTCGCGGCCGAAGCCGTGCGCGCCGCGGAAGCCGAAGCCAATGTCGCGCGCCTGAACCTCGGGTACACGCGCATCCTTTCGCCCATCGCCGGCCGGGTCAGCCGCGCCGAGATCACCCAGGGCAATCTCGTGTCGGGCGGCTCCGGCGAGGCGACGCTCCTCACGAACGTCGTGTCGCTCGACCCGATCTACGTCGAGTTCGAAGGCGACGAACAGATCTACCTGCTCTACACGCAGCGCAATCTCGCCGGCAACCGGCCGAGCTCGCGCAATGCGCCGAACCCCGTCTACATGGGGCTCGCCAACGACACGGGCTTTCCGTACGAAGGCCACATGGTGTTCGTCGACAACCAGATCAATCCGAACACCGGCACCATCCGTGCGCGCGCAGTGTTCGACAACGGCGCCGGCAAGTTCACGCCCGGCCTGTTCGCCCGGCTCCAGCTCCTGGGCAGCGGCAAGTACCAGGCGGTCCTGATCAACGATCGAGCGGTGGCGACCGACCAGGACCGCAAGTACGTGATGGTGGTGAACAAGGACAACATCCTGGAATACCGCGCCATCAAGCTCGGCCGCGTGATCGACGGCCTGCGCGTGGTGCGCGAGGGATTGAAACCGGGCGAGGTCATCGTGGTGAACGGATTGCAGCGCGTACGGCCGGGAATGCCCGTGCAGACCACGACGGTTCCGATGGACCTGGGCGTGACCAAGGGGCGAGGCGTGCCTCCGCCCGCAACGGCGTCCTCGTCCTCGTCCCTGTCCACGTCCTTCTGA
PROTEIN sequence
Length: 410
MLFSILTSSGRIALGFAVVLAALLAAGCGPEAAPAPQAMPVTVSTVLEREVAEWDEFTGRLRAIDSVEIRPRVSGYIDRIAFHEGGDVKKGDLLFVIDPKPFQAELQRAEAQVSSARAQAQLARQMRVNAEKLRSSGAISQDEFDERASADAVAAEAVRAAEAEANVARLNLGYTRILSPIAGRVSRAEITQGNLVSGGSGEATLLTNVVSLDPIYVEFEGDEQIYLLYTQRNLAGNRPSSRNAPNPVYMGLANDTGFPYEGHMVFVDNQINPNTGTIRARAVFDNGAGKFTPGLFARLQLLGSGKYQAVLINDRAVATDQDRKYVMVVNKDNILEYRAIKLGRVIDGLRVVREGLKPGEVIVVNGLQRVRPGMPVQTTTVPMDLGVTKGRGVPPPATASSSSSLSTSF*