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PLM4_65_coex_sep16_scaffold_1060

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1060_1
unknown

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3..71
DNA (69bp) protein (23aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1060_2
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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473..769
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9M1_DESTA
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM4_65_coex_sep16_scaffold_1060_3
unknown

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comp(925..1389)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1060_4

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1619..2986
DNA (1368bp) protein (456aa)
response regulator receiver Tax=Teredinibacter turnerae RepID=UPI00037B1132
Uncharacterized protein {ECO:0000313|EMBL:KKO00449.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver domain-containing protein
PLM4_65_coex_sep16_scaffold_1060_5
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3022..4005
DNA (984bp) protein (328aa)
Alpha/beta hydrolase fold Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZSR9_DESOH
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABW65982.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
PLM4_65_coex_sep16_scaffold_1060_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4014..5456)
DNA (1443bp) protein (481aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI0003718C34
carbohydrate kinase, fggy
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_1060_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5746..7188)
DNA (1443bp) protein (481aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8I617_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT72086.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
NodT family RND efflux system outer membrane lipoprotein
PLM4_65_coex_sep16_scaffold_1060_8
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7181..10432)
DNA (3252bp) protein (1084aa)
Transporter Tax=Ralstonia sp. AU12-08 RepID=S9TM00_9RALS
multidrug transport protein, acriflavin resistance protein domain
Transporter {ECO:0000313|EMBL:EPX99669.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
PLM4_65_coex_sep16_scaffold_1060_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10442..11671)
DNA (1230bp) protein (410aa)
RND transporter MFP subunit Tax=Pseudomonas moraviensis R28 RepID=V8R6C1_9PSED
RND transporter MFP subunit {ECO:0000313|EMBL:KIF59857.1}; Strain MEP34 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIP90809.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
multidrug efflux RND membrane fusion protein MexE
PLM4_65_coex_sep16_scaffold_1060_10
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11989..12906)
DNA (918bp) protein (306aa)
Transcriptional regulator Tax=Pseudomonas sp. GM17 RepID=J2N4M6_9PSED
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJM05454.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
PLM4_65_coex_sep16_scaffold_1060_11
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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13041..13994
DNA (954bp) protein (318aa)
NmrA family protein Tax=Gloeobacter kilaueensis JS1 RepID=U5QMR0_9CYAN
ycf39; NmrA family protein
NmrA family protein {ECO:0000313|EMBL:AGY60287.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM4_65_coex_sep16_scaffold_1060_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14064..15245)
DNA (1182bp) protein (394aa)
eryB; NAD binding site:D-amino acid oxidase (EC:1.1.5.3)
Aerobic glycerol-3-phosphate dehydrogenase Tax=Nitrosospira sp. APG3 RepID=M5DK56_9PROT
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_1060_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15245..16012)
DNA (768bp) protein (256aa)
Glycerophosphoryl diester phosphodiesterase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C151_NITHN
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ADE14608.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM4_65_coex_sep16_scaffold_1060_14
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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16132..18216
DNA (2085bp) protein (695aa)
Conserved domain protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7N2_MYXXD
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABF91968.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Displaying 14 items

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