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PLM4_90_b1_sep16_scaffold_1426

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1426_1
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(17..1249)
DNA (1233bp) protein (411aa)
ATP/GTP-binding domain protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ATP/GTP-binding domain-containing protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_1426_2
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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1790..2950
DNA (1161bp) protein (387aa)
Nicotinate phosphoribosyltransferase bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
nicotinate phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_1426_3
unknown

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comp(3005..3208)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_1426_4
CG_Nitrosp_02, Nitrospirae, Bacteria

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3294..4136
DNA (843bp) protein (281aa)
Uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative permease
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_1426_5
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(4182..5405)
DNA (1224bp) protein (408aa)
macrolide ABC transporter ATP-binding protein/permease (EC:3.6.3.-)
Macrolide export ATP-binding/permease protein MacB bin=GWB2_Nitrospirae_rel_47_37 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_1426_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(5402..6616)
DNA (1215bp) protein (405aa)
ABC-type transport system, permease component bin=GWB2_Nitrospirae_rel_47_37 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ABC transporter permease
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_1426_7
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(6794..7462)
DNA (669bp) protein (223aa)
macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
Macrolide export ATP-binding/permease protein MacB bin=GWC2_Syntrophobacterales_56_13 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_1426_8
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(7475..7621)
DNA (147bp) protein (49aa)
Efflux transporter, RND family, MFP subunit bin=GWB2_Nitrospirae_rel_47_37 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
efflux transporter, rnd family, mfp subunit
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_1426_9
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(7654..8613)
DNA (960bp) protein (320aa)
Efflux transporter, RND family, MFP subunit bin=GWC2_Syntrophobacterales_56_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
secretion protein HlyD
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_1426_10
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(8684..9976)
DNA (1293bp) protein (431aa)
Outer membrane efflux protein bin=GWB2_Nitrospirae_rel_47_37 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
outer membrane efflux protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_1426_11
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

10232..11128
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
Displaying 11 items

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