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PLM4_90_b1_sep16_scaffold_1598

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1598_1
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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3..368
DNA (366bp) protein (122aa)
Extracellular tungstate binding protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
extracellular tungstate binding protein
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_1598_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

375..800
DNA (426bp) protein (142aa)
Permease component of tungstate ABC transporter bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
tungstate ABC transporter permease
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_1598_3
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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784..999
DNA (216bp) protein (72aa)
Permease component of tungstate ABC transporter bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
tungstate transporter permease
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_1598_4
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

996..1649
DNA (654bp) protein (218aa)
phosphate import ATP-binding protein PstB 1 (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB 1 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_1598_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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2125..2910
DNA (786bp) protein (262aa)
NADH ubiquinone oxidoreductase-like protein (4: Predicted) bin=GWE2_RBX1_39_32 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NADH ubiquinone oxidoreductase-like protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_1598_6
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2900..4150
DNA (1251bp) protein (417aa)
Nickel-dependent hydrogenase large subunit bin=GWF2_Nitrospirae_44_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Nickel-dependent hydrogenase
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_1598_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(4314..4670)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037497B2
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_1598_8
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(5254..5502)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYX0_9BACT
Tax=GWA2_Nitrospirae_42_11_curated
PLM4_90_b1_sep16_scaffold_1598_9
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(5638..6057)
DNA (420bp) protein (140aa)
Toxin-antitoxin system bin=GWF2_Planctomycete_41_51 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
death-on-curing family protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM4_90_b1_sep16_scaffold_1598_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

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comp(6058..6315)
DNA (258bp) protein (86aa)
id=4282531 bin=GWF2_OP3_43_52 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
PLM4_90_b1_sep16_scaffold_1598_trna_1
unknown

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comp(6479..6552)
DNA (74bp)
transferRNA Arg
PLM4_90_b1_sep16_scaffold_1598_11
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

6971..7495
DNA (525bp) protein (175aa)
Transcription termination factor NusG domain protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
transcription termination factor NusG domain-containing protein
Tax=GWC2_Nitrospirae_42_7_curated
PLM4_90_b1_sep16_scaffold_1598_12
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7689..8396
DNA (708bp) protein (236aa)
Polysaccharide export protein bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
sugar transporter
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_90_b1_sep16_scaffold_1598_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8417..9889
DNA (1473bp) protein (491aa)
Lipopolysaccharide biosynthesis bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
lipopolysaccharide biosynthesis protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_90_b1_sep16_scaffold_1598_14
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9973..10626
DNA (654bp) protein (218aa)
ATPases involved in chromosome partitioning-like Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGX0_SYNFM
chromosome partitioning ATPase-like protein
ATPases involved in chromosome partitioning-like {ECO:0000313|EMBL:ABK16672.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM4_90_b1_sep16_scaffold_1598_15
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10909..12564
DNA (1656bp) protein (552aa)
Polysaccharide biosynthesis protein CapD Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJN3_ANASK
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ACG75614.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM4_90_b1_sep16_scaffold_1598_16
Jeotgalicoccus sp. 13MG44_air, Jeotgalicoccus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12564..13490
DNA (927bp) protein (309aa)
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase Tax=Eubacterium sp. AS15 RepID=J4UEB1_9FIRM
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:CDZ99058.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Jeotgalicoccus.;" source="Jeotgalicoccus sp. 13MG44_air.;"
glycosyl transferase family protein
Displaying 17 items

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