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PLM4_90_b1_sep16_scaffold_942

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_942_1
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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comp(205..876)
DNA (672bp) protein (224aa)
3-oxoacyl-(Acyl-carrier protein) reductase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
short-chain alcohol dehydrogenase
Tax=GWC2_Nitrospirae_42_7_curated
PLM4_90_b1_sep16_scaffold_942_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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1047..3656
DNA (2610bp) protein (870aa)
DNA mismatch repair protein MutS bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mutS; DNA mismatch repair protein MutS
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_942_3
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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3699..3815
DNA (117bp) protein (39aa)
Glycine cleavage system H protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
gcvH; glycine cleavage complex lipoylprotein
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_942_4
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

4051..5436
DNA (1386bp) protein (462aa)
lpdA2; dihydrolipoamide dehydrogenase LpdA (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase bin=GWB2_Nitrospirae_rel_47_37 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_942_5
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

5635..6909
DNA (1275bp) protein (425aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase bin=GWB2_Nitrospirae_rel_47_37 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
PLM4_90_b1_sep16_scaffold_942_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

6909..7235
DNA (327bp) protein (109aa)
Septum formation initiator family protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
septum formation initiator family protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_942_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

7204..9402
DNA (2199bp) protein (733aa)
Amylopullulanase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
amylopullulanase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_942_8
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

9404..9847
DNA (444bp) protein (148aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=DTD_THEM4
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_942_9
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

9847..12054
DNA (2208bp) protein (736aa)
1,4-alpha-glucan branching enzyme GlgB bin=GWF2_Nitrospirae_44_13 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_942_10
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12059..12331)
DNA (273bp) protein (91aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_90_b1_sep16_scaffold_942_11
unknown

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12508..12630
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 11 items

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