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PLM4_90_b1_sep16_scaffold_2018

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2018_1
CG_Nitrosp_02, Nitrospirae, Bacteria

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2..1285
DNA (1284bp) protein (428aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 bin=GWF2_Nitrospirae_44_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
fabF-2; 3-oxoacyl-(acyl carrier protein) synthase II
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_2018_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(1282..2271)
DNA (990bp) protein (330aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ribonuclease Z
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_2018_3
CG_Nitrosp_02, Nitrospirae, Bacteria

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2609..3607
DNA (999bp) protein (333aa)
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_2018_4
CG_Nitrosp_02, Nitrospirae, Bacteria

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3642..5090
DNA (1449bp) protein (483aa)
glycogen synthase (EC:2.4.1.21)
Glycogen synthase bin=GWF2_Nitrospirae_44_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_2018_5
unknown

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comp(5137..5259)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_2018_6
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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7095..7445
DNA (351bp) protein (117aa)
Response regulator bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response regulator
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_2018_7
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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7446..9428
DNA (1983bp) protein (661aa)
Molybdenum cofactor synthesis domain protein bin=GWF2_Nitrospirae_44_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
molybdenum cofactor synthesis domain-containing protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_2018_8
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(9433..10761)
DNA (1329bp) protein (443aa)
endopeptidase LytE (EC:3.4.-.-)
Probable endopeptidase LytE bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_2018_9
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(10778..11308)
DNA (531bp) protein (177aa)
Segregation and condensation protein B bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
scpB; segregation and condensation protein B
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_2018_10
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

11880..12062
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39V25_GEOMG
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_2018_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12062..12421
DNA (360bp) protein (120aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase, HAMP domain-containing Tax=Geobacter metallireducens RepID=Q39V26_GEOMG
sensor histidine kinase, HAMP domain-containing
Displaying 11 items

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